ID   KU729274; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   KU729274;
XX
DT   02-MAR-2016 (Rel. 128, Created)
DT   27-JUN-2018 (Rel. 137, Last updated, Version 3)
XX
DE   Squalius sp. Ex51A12 cytochrome oxidase subunit 1 (COI) gene, partial cds;
DE   mitochondrial.
XX
KW   .
XX
OS   Squalius sp. Ex51A12
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Squalius; unclassified Squalius.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RA   Behrens-Chapuis S., Herder F., Esmaeili H.R., Freyhof J., Hamidan N.A.,
RA   Ozulug M., Sanda R., Geiger M.F.;
RT   "Adding nuclear rhodopsin data where COI-based barcoding fails - from no
RT   benefit at all to the solution of a taxonomic conflict";
RL   DNA Barcodes (Berlin) 3:187-199(2016).
XX
RN   [2]
RP   1-652
RA   Geiger M.F.;
RT   ;
RL   Submitted (11-FEB-2016) to the INSDC.
RL   Ichtyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; de4411ade9d2571a081be3df48ec316e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Squalius sp. Ex51A12"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Kura"
FT                   /lat_lon="41.06 N 43.21 E"
FT                   /specimen_voucher="Ex51A12"
FT                   /identified_by="Joerg Freyhof"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1803952"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:A0A140EH17"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A0A140EH17"
FT                   /protein_id="AML26988.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAVNFITTIINMKPPAISQYQ
FT                   TPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 161 A; 177 C; 128 G; 186 T; 0 other;
     cctttatctt gtatttggtg cctgagccgg aatagtgggg actgccttaa gcctccttat        60
     tcgggccgaa ctaagccaac ccgggtcact tttaggcgat gaccaaattt ataatgtcat       120
     tgttaccgcc cacgccttcg taataatttt ctttatagtc atgccaattc ttattggggg       180
     attcggaaac tgacttgtcc cactaatgat tggtgcgccc gacatagcat tcccacgaat       240
     aaacaacatg agcttctggc ttctaccccc atcgttccta ctactattag cctcttctgg       300
     tgtagaggct ggggccggaa caggatgaac agtataccca ccgcttgcgg gtaatcttgc       360
     ccacgcagga gcatcagtag atttaacaat cttctcactt cacctggcgg gtgtatcatc       420
     aattttaggg gcagtcaact tcattaccac aattattaat atgaaacccc cagccatctc       480
     ccagtaccaa acacctctat ttgtatgagc cgtgctggtg acagccgtcc tcctcctcct       540
     atcattacca gtcttagctg ccggaattac aatgcttctt acagatcgta atcttaatac       600
     tacattcttt gacccggcag gaggaggaga cccaatccta tatcaacact tg               652
//