ID   KU139073; SV 1; linear; genomic DNA; STD; FUN; 1392 BP.
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AC   KU139073;
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DT   16-DEC-2016 (Rel. 131, Created)
DT   05-DEC-2024 (Rel. 144, Last updated, Version 2)
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DE   Albomagister griseosquamosus voucher TENN:064609 RNA polymerase II largest
DE   subunit (rpb1) gene, partial cds.
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KW   .
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OS   Albomagister griseosquamosus
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Tricholomatineae; Tricholomataceae;
OC   Albomagister.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-1392
RX   PUBMED; 27767208.
RA   Sanchez-Garcia M., Matheny P.B.;
RT   "Is the switch to an ectomycorrhizal state an evolutionary key innovation
RT   in mushroom-forming fungi? A case study in the Tricholomatineae
RT   (Agaricales)";
RL   Evolution:(2016).
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RN   [2]
RP   1-1392
RA   Sanchez-Garcia M.;
RT   ;
RL   Submitted (10-NOV-2015) to the INSDC.
RL   Ecology and Evolutionary Biology, University of Tennessee, 332 Hesler
RL   Biology Building, Knoxville, TN 37996-1610, USA
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DR   MD5; 7dc7648b000cae39795c0f400c21f2cc.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1392
FT                   /organism="Albomagister griseosquamosus"
FT                   /strain="ECV4038"
FT                   /mol_type="genomic DNA"
FT                   /geo_loc_name="USA: Tennessee, Great Smoky Mountains
FT                   National Park, Elkmont, Jake's Creek Trail area"
FT                   /specimen_voucher="TENN:064609"
FT                   /collected_by="E.C. Vellinga"
FT                   /collection_date="04-Aug-2008"
FT                   /tissue_type="Basidiocarp"
FT                   /db_xref="taxon:3383004"
FT   gene            <1..>1392
FT                   /gene="rpb1"
FT                   /note="conserved domains A to C"
FT   mRNA            join(<1..39,112..183,750..992,1048..>1337)
FT                   /gene="rpb1"
FT                   /product="RNA polymerase II largest subunit"
FT   CDS             join(<1..39,112..183,750..992,1048..>1337)
FT                   /codon_start=1
FT                   /gene="rpb1"
FT                   /product="RNA polymerase II largest subunit"
FT                   /protein_id="APH07705.1"
FT                   /translation="GHIELARPVFHPGGFIVKVKKILESICVNCGKLKADISDPNFADK
FT                   IRHVRDPKARMSIVWSHCKTKTVCEPDDPKDEGEPDNEDVKKGHGGCGHIQPQIRKEGL
FT                   KLFVQYKKTKDDDEEVKSLQPDKRLFTPSDVYTVLKKMSDHDLHLIGLSDEYARPEWMI
FT                   LTVMPVPPPPVRPSIAVDGGAMRSEDDLTYKLGDIIKASANVRRCEQEGAPA"
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SQ   Sequence 1392 BP; 326 A; 341 C; 346 G; 379 T; 0 other;
     ggtcatattg agttggcgag gccagttttc caccctggtg cgctcatttg cacatgtttc        60
     cgtgcacatg tttccgtttt cttgaccgag cgctgatacc tttcgtcaac aggcttcatt       120
     gtaaaagtta aaaagatcct cgaaagtata tgtgtaaact gcggaaagct taaagctgac       180
     atcgtgagtc gcatctctcg ttcctctatt cgtttcgcac ccccacatcc caattttctg       240
     ggggctctct ccataatcca tggagaaccc caaacccgcg ccacgttttg ttcccttggt       300
     tatcatgggc gttcttctgc ccgtggcggg ggggtcgtgt aacgcgcgtt ttcgatcgct       360
     tgatcgccgc gttgaccccg ttgcacccgc ccggtgtcag ttgggcacgt ggttgcgtgg       420
     tgaaatgggg ggctgaacga ggagtgcgaa aatgtgtgca gctcgtgtgc cgtgaaaagt       480
     cacgttcttg cagggatgga taagcccaat cgcactatac actgtgacgc agtggcagtg       540
     acgtgttgtg gtattcagca cttgtgactc gaagtctaat gcccccgtct ttgttgtgcg       600
     cctttcatgt cctgctgtgg ggttcggacg tgttgcccat tgtagacaca atatgctgac       660
     gttcccgttc acatatctgt tttaaacaca ctcatcgact gttcactttc aaatctcctc       720
     acgatcaatg ttatatccaa taacttaagt cggatcctaa tttcgctgac aaaatccgcc       780
     acgttcgcga tccgaaagct cgaatgtcca ttgtctggtc gcattgcaaa accaagacgg       840
     tttgcgaacc tgacgacccc aaagatgagg gggaaccgga taacgaggat gtcaagaagg       900
     ggcatggtgg atgtggacac atccagcctc aaatcaggaa ggaaggcctt aagctttttg       960
     ttcaatacaa aaaaacaaaa gacgacgatg aggtttgggt ttaagttatc agccaatgcg      1020
     ttattcccac ttattggtct ttaacaggag gtcaaatcat tacagcctga caagcggtta      1080
     tttacccctt ctgacgttta cactgtgtta aaaaagatgt ccgaccacga cctgcattta      1140
     attgggcttt cggacgagta tgcgcggcca gaatggatga tcctgactgt tatgcctgtg      1200
     cctcctccgc ctgtacgacc aagtattgcc gttgatggtg gtgcgatgag gagtgaagat      1260
     gatctgacat acaaactcgg cgacatcatc aaagcttctg cgaacgtccg ccgatgtgag      1320
     caagaaggtg ctcctgcaca cgttatctcg gaatttgagc agcttctaca ggcaagattt      1380
     tgcattatca tc                                                          1392
//