ID   KJ553525; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   KJ553525;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 6)
XX
DE   Garra jordanica isolate Ex16A11 cytochrome oxidase subunit I gene, partial
DE   cds; mitochondrial.
XX
KW   .
XX
OS   Garra jordanica
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Garra.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RA   Hamidan N.A., Geiger M.F., Freyhof J.;
RT   "Garra jordanica, a new species from the Dead Sea basin with remarks on the
RT   relationship of G. ghorensis, G. tibanica and G. rufa (Teleostei:
RT   Cyprinidae)";
RL   Ichthyol. Explor. Freshw. 25(3):223-236(2014).
XX
RN   [2]
RP   1-652
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [3]
RP   1-652
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 051ce226eb2174cecd4d1714afc0288e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Garra jordanica"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex16A11"
FT                   /mol_type="genomic DNA"
FT                   /country="Syria:Jordan drainage"
FT                   /lat_lon="32.74 N 35.98 E"
FT                   /specimen_voucher="ZFMK:FSJF:1206"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1523538"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5EY60"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5EY60"
FT                   /protein_id="AHW78276.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQ
FT                   TPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 171 A; 169 C; 122 G; 190 T; 0 other;
     cctttatctt gtattcggtg cttgagctgg tatagtagga actgccctaa gcctccttat        60
     ccgagctgag ctaagccagc ctggatcgct tttaggtgat gaccaaatct acaacgtcat       120
     cgttactgct cacgcttttg taataatttt ctttatagtt atacctattc taatcggggg       180
     gtttgggaat tgacttgtgc cgctaataat tggggcccca gacatagcgt tcccacgaat       240
     aaataatata agcttctgac tattaccccc gtcatttcta ttattactgg cctcatctgg       300
     cgtagaagcc ggagccggaa cgggatgaac agtttaccca ccccttgcag gcaaccttgc       360
     ccatgcagga gcgtcagtag acttaacaat tttctcatta catctagcag gagtgtcatc       420
     aattctaggg gctattaatt ttattaccac aaccattaac ataaaacccc cagccatctc       480
     ccaatatcaa acaccactct tcgtgtggtc tgtacttgta accgccgtac tacttctatt       540
     atcactgcca gtgctagctg ccgggattac aatgcttcta acagatcgaa accttaacac       600
     cacatttttt gacccagcag gaggaggaga cccaattctt tatcaacacc ta               652
//