ID   KJ553236; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   KJ553236;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 5)
XX
DE   Cobitis sp. BOLD:ACL7714 isolate Ex39E2 cytochrome oxidase subunit I gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cobitis sp. BOLD:ACL7714
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Cobitis; unclassified Cobitis.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [2]
RP   1-652
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 02c209f843bb4c9b3820e654b5a9d165.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cobitis sp. BOLD:ACL7714"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex39E2"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Seyhan drainage"
FT                   /lat_lon="36.98 N 35.34 E"
FT                   /specimen_voucher="ZFMK:FSJF:289"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1484507"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5EX91"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5EX91"
FT                   /protein_id="AHW77987.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQ
FT                   TPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 157 A; 158 C; 117 G; 220 T; 0 other;
     cctctacctt gtatttggtg cctgagccgg aatggttgga actgctctca gtctcctaat        60
     tcgtgctgag cttagccaac ccgggtctct ccttggggat gaccaaattt ataatgttat       120
     tgttactgca catgcctttg tcatgatttt ctttatagta atgccgattc ttattggtgg       180
     ttttggtaat tgactagttc cgttaataat tggtgcacca gatatagcat ttccacgaat       240
     aaataatata agcttctgac ttcttccacc ctcatttctt ctcttgctag catcttctgg       300
     tgttgaagct ggagccggga caggttgaac cgtctaccct ccactagctg gtaacctcgc       360
     ccacgcaggt gcatctgtag acctaactat cttctcctta cacttggcag gagtttcatc       420
     tattttagga gcaattaact ttattaccac aacaattaat ataaaacccc cggccatctc       480
     acaataccag actcccctgt ttgtatgagc agttcttgta accgctgttc ttcttttatt       540
     atcactacct gtactagctg ctggaattac aatattatta acagatcgta atttaaatac       600
     cacattcttt gacccggcgg gtggaggaga ccctattctt tatcaacact ta               652
//