ID   KJ553029; SV 1; linear; genomic DNA; STD; VRT; 649 BP.
XX
AC   KJ553029;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 5)
XX
DE   Cobitis sp. BOLD:ACL7836 isolate Ex19C9 cytochrome oxidase subunit I gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cobitis sp. BOLD:ACL7836
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Cobitis; unclassified Cobitis.
OG   Mitochondrion
XX
RN   [1]
RP   1-649
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [2]
RP   1-649
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 9710273d48c96cd9da39cb1e0d2f5606.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..649
FT                   /organism="Cobitis sp. BOLD:ACL7836"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex19C9"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Karadirek drainage"
FT                   /lat_lon="38.97 N 30.34 E"
FT                   /specimen_voucher="ZFMK:FSJF:1520"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1484509"
FT   CDS             <1..>649
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5EQI9"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5EQI9"
FT                   /protein_id="AHW77780.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPMLIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQ
FT                   TPLFVWAVLVTAVLLLLSLPVLAAGITMLLTNRNLNTTFFDPAGGGDPIHYQH"
XX
SQ   Sequence 649 BP; 154 A; 174 C; 118 G; 203 T; 0 other;
     cctttacctt gtatttggtg cctgagccgg aatggttgga actgccctca gtctcctaat        60
     tcgtgctgag cttagccaac ccgggtctct ccttggagat gaccaaattt ataatgttat       120
     tgttactgca catgccttcg tcatgatttt ctttatagta ataccaatac ttattggtgg       180
     gtttggtaat tgacttgttc cactaataat tggggcacca gacatagcat tcccacgaat       240
     aaataacata agcttttgac tcctgccgcc ctctttcctt ctcttattag catcttctgg       300
     tgttgaagct ggagccggga cgggttgaac tgtttatccc ccactagccg gcaaccttgc       360
     ccacgcaggc gcatctgtag accttactat cttttccttg cacttagcag gggtctcatc       420
     tattctaggg gcaatcaatt ttattactac aacaattaac atgaagcccc ccgccatttc       480
     acagtaccaa acccccttat ttgtttgagc agtccttgta accgctgttc ttcttctact       540
     ctcactaccc gtgctagctg ctggaattac aatacttcta acaaaccgaa acttaaacac       600
     tacattcttt gacccagcag gtgggggaga ccccattcat taccaacat                   649
//