ID   KJ552978; SV 1; linear; genomic DNA; STD; VRT; 634 BP.
XX
AC   KJ552978;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 5)
XX
DE   Cobitis sp. BOLD:ACL7836 isolate Ex52F12 cytochrome oxidase subunit I gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cobitis sp. BOLD:ACL7836
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Cobitis; unclassified Cobitis.
OG   Mitochondrion
XX
RN   [1]
RP   1-634
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [2]
RP   1-634
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; c0baeaad086ab0d261b73649549e5400.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..634
FT                   /organism="Cobitis sp. BOLD:ACL7836"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex52F12"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Bueyuek Menderes drainage"
FT                   /lat_lon="38.14 N 29.03 E"
FT                   /specimen_voucher="ZFMK:FSJF:1513"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1484509"
FT   CDS             <1..>634
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5EXG6"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5EXG6"
FT                   /protein_id="AHW77729.1"
FT                   /translation="AWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVMIFF
FT                   MVMPMLIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT
FT                   VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQTPLFVW
FT                   AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 634 BP; 150 A; 170 C; 117 G; 197 T; 0 other;
     tgcctgagcc ggaatggttg gaactgccct cagtctccta attcgtgctg agcttagcca        60
     acccgggtct ctccttggag atgaccaaat ttataatgtt attgttactg cacatgcctt       120
     cgtcatgatt ttctttatag taataccaat acttattggt gggtttggta attgacttgt       180
     tccactaata attggggcac cagacatagc attcccacga ataaataaca taagcttttg       240
     actcctgccg ccctctttcc ttctcttatt agcatcttct ggtgttgaag ctggagccgg       300
     gacgggttga actgtttatc ccccactagc cggcaacctt gcccacgcag gcgcatctgt       360
     agaccttact atcttttcct tgcacttagc gggggtctca tctattctag gggcaatcaa       420
     ttttattact acaacaatta acatgaagcc ccccgccatt tcacagtacc aaaccccctt       480
     atttgtttga gcagtccttg taaccgctgt tcttcttcta ctctcactac ccgtgctagc       540
     tgctggaatt acaatacttc taacagaccg aaacttaaac actacattct ttgacccagc       600
     aggtggggga gaccccattc tttaccaaca ttta                                   634
//