ID   KJ552809; SV 1; linear; genomic DNA; STD; VRT; 643 BP.
XX
AC   KJ552809;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 5)
XX
DE   Cobitis sp. BOLD:ACL7277 isolate Ex14B12 cytochrome oxidase subunit I gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cobitis sp. BOLD:ACL7277
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Cobitis; unclassified Cobitis.
OG   Mitochondrion
XX
RN   [1]
RP   1-643
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [2]
RP   1-643
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 01411e9f78e8f86e6443dd8e52286831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..643
FT                   /organism="Cobitis sp. BOLD:ACL7277"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex14B12"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Dalaman drainage"
FT                   /lat_lon="36.81 N 28.8 E"
FT                   /specimen_voucher="ZFMK:FSJF:333"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1484505"
FT   CDS             <1..>643
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5EPN4"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5EPN4"
FT                   /protein_id="AHW77560.1"
FT                   /translation="VFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHAFVM
FT                   IFFMVMPIIIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGT
FT                   GWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQTPL
FT                   FVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 643 BP; 154 A; 161 C; 117 G; 211 T; 0 other;
     tgtatttggt gcctgagccg gaatggttgg aactgccctc agtctcctaa ttcgtgctga        60
     gcttagccaa cccgggtctc tccttgggga tgaccaaatt tataatgtta ttgttactgc       120
     acatgccttt gttataattt tctttatagt aataccaatt attattggcg gatttggtaa       180
     ctggctaatt ccactaataa ttggggcacc agacatagca ttccctcgta taaataatat       240
     aagcttttga cttctaccac cctcattcct tctcttgtta gcatcttctg gtgttgaagc       300
     tggagccggg acaggctgaa ctgtttatcc cccactagcc ggtaacctag cccacgcagg       360
     tgcatctgta gaccttacta tcttctctct ccatttagca ggggtttcat ctattctagg       420
     ggcaattaat tttattacca caacaattaa tatgaagccc ccagccatct cacaatatca       480
     aacccctctg tttgtatgag cagttcttgt aaccgctgtt cttcttctgc tatctctacc       540
     tgttctagct gctggaatta caatgctttt aacagaccgt aacctaaata ccacattctt       600
     tgacccggca ggtggaggag accctattct ctatcagcac tta                         643
//