ID   KJ552357; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   KJ552357;
XX
DT   17-APR-2014 (Rel. 120, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 5)
XX
DE   Cobitis sp. BOLD:ACL6589 isolate Ex52D11 cytochrome oxidase subunit I gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cobitis sp. BOLD:ACL6589
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cobitidae; Cobitinae; Cobitis; unclassified Cobitis.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1111/1755-0998.12257.
RX   PUBMED; 24690331.
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.,
RA   Dettai A., Doadrio I., Kalogianni E., Karst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   "Spatial heterogeneity in the Mediterranean Biodiversity Hotspot affects
RT   barcoding accuracy of its freshwater fishes";
RL   Mol Ecol Resour 14(6):1210-1221(2014).
XX
RN   [2]
RP   1-652
RA   Geiger M.F., Herder F., Monaghan M.T., Almada V., Barbieri R., Bariche M.,
RA   Berrebi P., Bohlen J., Casal-Lopez M., Delmastro G.B., Denys G.P.J.,
RA   Dettai A., Doadrio I., Kalogianni E., Kaerst H., Kottelat M., Kovacic M.,
RA   Laporte M., Lorenzoni M., Marcic Z., Ozulug M., Perdices A., Perea S.,
RA   Persat H., Porcelotti S., Puzzi C., Robalo J., Sanda R., Schneider M.,
RA   Slechtova V., Stoumboudi M., Walter S., Freyhof J.;
RT   ;
RL   Submitted (04-MAR-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 96db64d96f3eb0a10a25564da498762e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cobitis sp. BOLD:ACL6589"
FT                   /organelle="mitochondrion"
FT                   /isolate="Ex52D11"
FT                   /mol_type="genomic DNA"
FT                   /country="Turkey:Soysalli drainage"
FT                   /lat_lon="38.39 N 35.37 E"
FT                   /specimen_voucher="ZFMK:FSJF:965"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1484504"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:X5FCV2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:X5FCV2"
FT                   /protein_id="AHW77108.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQ
FT                   TPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 158 A; 167 C; 116 G; 211 T; 0 other;
     cctctacctt gtatttggtg cctgagccgg aatggttgga actgccctca gcctcttaat        60
     tcgtgctgag cttagccaac ccgggtctct ccttggggac gaccaaattt ataatgttat       120
     tgttactgca catgcctttg ttataatttt ctttatagta atgccaattc ttattggcgg       180
     gtttggtaat tgactagtcc cactaataat tggggcacca gacatagcat ttcctcgaat       240
     aaataatata agcttttgac ttctaccacc ctcattcctt ctcttgctgg catcttctgg       300
     tgttgaagct ggagccggga caggttgaac cgtctatccc ccactagccg gtaacttagc       360
     ccacgcaggc gcatctgtag accttactat cttctctctc cacttagcag gggtttcatc       420
     tattctaggg gcaatcaatt ttattaccac aacaattaat ataaaacccc cagccatttc       480
     acaatatcag acccccctat ttgtatgagc agttcttgta accgctgttc ttcttctatt       540
     atctttacct gttttagcgg ctggaattac aatactttta acagaccgta acctaaatac       600
     cacattcttt gacccggcag gtggaggaga ccccattcta tatcaacatt ta               652
//