ID   KF590403; SV 1; linear; genomic DNA; STD; VRT; 654 BP.
XX
AC   KF590403;
XX
DT   11-NOV-2013 (Rel. 118, Created)
DT   29-JUN-2018 (Rel. 137, Last updated, Version 3)
XX
DE   Squalus hemipinnis voucher IBRC.01.88.01 cytochrome oxidase subunit 1 (COI)
DE   gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Squalus hemipinnis
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC   Elasmobranchii; Squalomorphii; Squaliformes; Squalidae; Squalus.
OG   Mitochondrion
XX
RN   [1]
RP   1-654
RA   Sembiring A., Pertiwi N.P.D., Mahardini A., Wulandari R., Kurniasih E.M.,
RA   Kuncoro A.W., Cahyani N.K.D., Anggoro A.W., Ulfa M., Madduppa H.,
RA   Carpenter K.E., Barber P.H., Mahardika G.N.;
RT   "DNA barcoding reveals targeted fisheries for endangered sharks in
RT   Indonesia";
RL   Fish. Res. 164:130-134(2015).
XX
RN   [2]
RP   1-654
RA   Sembiring A., Pertiwi P.D., Anggoro A., Cahyani K.D., Mahardini A.,
RA   Wulandari R., Narendra G.N., Ariwibowo A., Kuncoro A.W., Ulfa M., Rahmad,
RA   Kurniasih E.M., Ambariyanto, Carpenter K., Barber P.H., Mahardika G.N.;
RT   ;
RL   Submitted (21-AUG-2013) to the INSDC.
RL   Indonesian Biodiversity Research Center, Udayana University, Jl Raya
RL   sesetan gg Markisa No 6, Denpasar, Bali 80223, Indonesia
XX
DR   MD5; e7c590ea6c7d36994126176aad1148c3.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..654
FT                   /organism="Squalus hemipinnis"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia:Pelabuhan Ratu, West Java"
FT                   /specimen_voucher="IBRC.01.88.01"
FT                   /collected_by="A. Sembiring, N. Pertiwi"
FT                   /collection_date="29-Sep-2012"
FT                   /PCR_primers="fwd_name: fish bcl, fwd_seq:
FT                   tcaacyaatcayaaagatatyggcac, rev_name: fish bch, rev_seq:
FT                   taaacttcagggtgaccaaaaaatca"
FT                   /db_xref="taxon:436872"
FT   gene            <1..>654
FT                   /gene="COI"
FT   CDS             <1..>654
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:A5HM25"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A5HM25"
FT                   /protein_id="AGZ83795.1"
FT                   /translation="LYLIFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAGVEAG
FT                   AGTGWTVYPPLAGNMAHAGASVDLAIFSLHLAGISSILASINFITTIINMKPPAISQYQ
FT                   TPLFVWSILVTTVLLLLSLPVLAAAITMLLTDRNLNTTFFDPAGGGDPILYQHLF"
XX
SQ   Sequence 654 BP; 164 A; 155 C; 108 G; 227 T; 0 other;
     ctttatttaa tctttggtgc atgagcaggg atagtaggta ccgcccttag cttacttatt        60
     cgagcagaat taagccaacc tggttctctt ctgggagatg atcaaatcta taatgttatc       120
     gtaactgctc acgcttttgt aataatcttt tttatagtaa tgcctgtaat aatcggtgga       180
     ttcggaaact gattagtacc tttaatgatt ggtgcaccag acatggcttt tccacgaata       240
     aataatataa gcttttgatt attgcctccc tccctcctgt tacttttagc ctctgctggt       300
     gtagaagcgg gagccggaac cggctgaaca gtctaccccc ctctcgcagg taatatagct       360
     catgctggag catccgtaga cttagccatc ttctcactcc atttggctgg tatttcctca       420
     attttagcct ctattaattt tattacaact attattaata taaaaccacc tgctatttct       480
     cagtatcaaa caccactctt tgtttgatcc atccttgtaa ccacagttct tcttcttctt       540
     tctcttcctg ttctcgcagc cgcaattacg atactattaa ctgaccgtaa tttaaacaca       600
     acattttttg accctgctgg agggggagac ccaattctct accaacattt attt             654
//