ID   KC962192; SV 1; linear; genomic DNA; STD; INV; 658 BP.
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AC   KC962192;
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DT   28-NOV-2013 (Rel. 119, Created)
DT   28-NOV-2013 (Rel. 119, Last updated, Version 1)
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DE   Lysmata amboinensis voucher UMML:32.9451 cytochrome oxidase subunit 1 (CO1)
DE   gene, partial cds; mitochondrial.
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KW   .
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OS   Lysmata amboinensis (scarlet cleaner shrimp)
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Alpheoidea; Hippolytidae; Lysmata.
OG   Mitochondrion
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RN   [1]
RP   1-658
RA   Baeza J.A., Fuentes M.S.;
RT   "Exploring phylogenetic informativeness and nuclear copies of mitochondrial
RT   DNA (numts) in three commonly used mitochondrial genes: mitochondrial
RT   phylogeny of peppermint, cleaner, and semi-terrestrial shrimps (Caridea:
RT   Lysmata, Exhippolysmata, and Merguia)";
RL   Zool. J. Linn. Soc. 168(4):699-722(2013).
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RN   [2]
RP   1-658
RA   Baeza J.A.;
RT   ;
RL   Submitted (24-APR-2013) to the INSDC.
RL   SMSFP, Smithsonian Institution, 701 Seaway Drive, Fort Pierce, FL 34949,
RL   USA
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DR   MD5; cb4088a4a2d90d1d9864db4197d9564a.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..658
FT                   /organism="Lysmata amboinensis"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="UMML:32.9451"
FT                   /note="authority: Lysmata amboinensis De Man 1888"
FT                   /db_xref="taxon:575568"
FT   gene            <1..>658
FT                   /gene="CO1"
FT   CDS             <1..>658
FT                   /codon_start=2
FT                   /transl_table=5
FT                   /gene="CO1"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:V5NYE2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:V5NYE2"
FT                   /protein_id="AHA94461.1"
FT                   /translation="TLYFIFGSWAGMVGTALSLLIRAELGQPGSLIGNDQIYNVIVTAH
FT                   AFVMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLCLLLSSGMVES
FT                   GVGTGWTVYPPLSAGIAHAGASVDMGIFSLHLAGVSSILGAVNFMTTVINMRSTGMSMD
FT                   RMPLFVWSVFLTAILLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPVLYQHLF"
XX
SQ   Sequence 658 BP; 158 A; 156 C; 125 G; 219 T; 0 other;
     taccttatac tttattttcg gttcatgggc tggtatagtc ggcacagccc taagcctgtt        60
     aatccgggct gagctcgggc agcctggtag ccttattggt aacgaccaaa tctataatgt       120
     tattgtaaca gctcacgctt ttgtaataat tttctttata gttataccaa ttataattgg       180
     aggcttcgga aactggctag ttccactaat gctaggggct cccgatatag ctttcccccg       240
     tataaataac ataagatttt ggctccttcc cccttctctt tgcctcctcc tctctagagg       300
     tatagtagaa agaggagttg gtacaggatg aactgtgtat ccccctcttt ctgctggaat       360
     tgcgcatgct ggagcctcag tagacatagg aatcttttct ctccacctag ctggagtttc       420
     ttcgatttta ggagccgtta actttatgac tactgttatc aatatacgaa gaactgggat       480
     atcaatagac cgtatacccc tctttgtttg atctgtattc ttaaccgcta ttctactcct       540
     tctctcacta cccgtcctag caggagcaat cactatactt ttaactgacc gtaacctaaa       600
     tacatctttc tttgatccag cagggggtgg agacccagtc ttgtatcaac atttattt         658
//