ID   JX291973; SV 1; linear; genomic DNA; STD; VRT; 895 BP.
XX
AC   JX291973;
XX
DT   26-MAR-2013 (Rel. 116, Created)
DT   26-MAR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Carlia rubigo isolate CpM2 NADH dehydrogenase subunit 4 (ND4) gene, partial
DE   cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene,
DE   partial sequence; mitochondrial.
XX
KW   .
XX
OS   Carlia rubigo (Orange-flanked rainbow skink)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata; Scincidae;
OC   Eugongylinae; Carlia.
OG   Mitochondrion
XX
RN   [1]
RP   1-895
RA   Hoskin C.J., Couper P.J.;
RT   "Description of two new Carlia species (Reptilia: Scincidae) from
RT   north-east Australia, elevation of Carlia pectoralis inconnexa Ingram &
RT   Covacevich 1989 to full species status, and redescription of Carlia
RT   pectoralis (de Vis 1884)";
RL   Zootaxa 3546:1-28(2012).
XX
RN   [2]
RP   1-895
RA   Hoskin C.J.;
RT   ;
RL   Submitted (07-JUL-2012) to the INSDC.
RL   School of Marine & Tropical Biology, James Cook University, James Cook Dr,
RL   Townsville, QLD 4811, Australia
XX
DR   MD5; 5e8ab5c6eb56664e9800c9e611582a88.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..895
FT                   /organism="Carlia rubigo"
FT                   /organelle="mitochondrion"
FT                   /isolate="CpM2"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia:Magnetic Island"
FT                   /note="PCR_primers=fwd_name: nd4, rev_name: tleu2"
FT                   /db_xref="taxon:1306872"
FT   gene            <1..718
FT                   /gene="ND4"
FT   CDS             <1..718
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /transl_except=(pos:718,aa:TERM)
FT                   /gene="ND4"
FT                   /product="NADH dehydrogenase subunit 4"
FT                   /note="TAA stop codon is completed by the addition of 3' A
FT                   residues to the mRNA"
FT                   /db_xref="GOA:M4T4F5"
FT                   /db_xref="InterPro:IPR001750"
FT                   /db_xref="InterPro:IPR003918"
FT                   /db_xref="UniProtKB/TrEMBL:M4T4F5"
FT                   /protein_id="AGH62602.1"
FT                   /translation="VEAPIAGSMVLAAVLLKLGGYGIIRITPMLNPATTELYYPFIMLA
FT                   IWGIIMTSSICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLAGAMTLMVAHGLTSS
FT                   VLFCLANTNYERTHSRTMLLARGLQLILPMMTTWWLLANLMNMALPPTINLTGELLIIS
FT                   STFDWSSFTIIMTGAGTLLTATYSLYMFLITQRNKLPTSTINTNPTQTREHLLMALHIL
FT                   PMLLLLMKPALVMGPFT"
FT   misc_feature    719..>895
FT                   /note="contains tRNA-His, tRNA-Ser, and tRNA-Leu"
XX
SQ   Sequence 895 BP; 284 A; 232 C; 136 G; 243 T; 0 other;
     gtagaagccc caatcgcagg ctccatagta ttggcagcag tattattaaa attggggggc        60
     tacggtatta tccgtattac cccaatacta aacccggcca caacagaact ttactaccca       120
     tttattatgc tagccatctg agggattatt ataacaagct ccatttgctt acgacaaact       180
     gacctaaagt cattaattgc ttattcatca gtaagccaca tgggccttgt aatcgctgct       240
     accataattc aaaccccctg aagcctagcc ggggctataa cactaatagt cgcccatggc       300
     cttacgtcct ctgttctctt ctgtttagca aacactaact acgagcgtac ccatagtcga       360
     actatgctct tagcacgcgg cctacaactc attcttccta tgataacaac atgatgacta       420
     ttagctaact taataaacat ggccctacca ccaacaatca acctaacagg agaactttta       480
     atcatttcat ctacatttga ctggtcaagc tttaccatta ttataactgg ggcaggaacc       540
     ctgttaacag caacatactc actatacata ttcttaatta cacaacgaaa taagctacca       600
     acaagcacca ttaacacaaa ccccactcaa acacgggaac atcttttaat ggcacttcac       660
     atcctcccta tacttcttct tctaataaaa cccgccctag taatgggccc ttttacatgt       720
     cactatagtt taataaaaca ttagaatgtg gacctaaaaa tagaagttta actcttctta       780
     gtgaccgaag ggggtcagaa cacaaagaac tgctaattcc tcgccctggg gttaaaatcc       840
     ccagaccctt cacttttaaa ggatagaagc ataatccatt ggttttaggc gccaa            895
//