ID   JQ306169; SV 1; linear; genomic DNA; STD; INV; 565 BP.
XX
AC   JQ306169;
XX
DT   12-FEB-2012 (Rel. 111, Created)
DT   12-FEB-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pasiphaea hoplocerca voucher JSDPX63-01 cytochrome oxidase subunit 1 (COI)
DE   gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Pasiphaea hoplocerca
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Pasiphaeoidea; Pasiphaeidae; Pasiphaea.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-565
RX   DOI; 10.1371/journal.pone.0019449.
RX   PUBMED; 21589909.
RA   Matzen da Silva J., Creer S., dos Santos A., Costa A.C., Cunha M.R.,
RA   Costa F.O., Carvalho G.R.;
RT   "Systematic and evolutionary insights derived from mtDNA COI barcode
RT   diversity in the Decapoda (Crustacea: Malacostraca)";
RL   PLoS One 6(5):E19449-E19449(2011).
XX
RN   [2]
RP   1-565
RA   Matzen da Silva J., Creer S., dos Santos A., Costa A.C., Cunha M.R.,
RA   Costa F.O., Carvalho G.R.;
RT   ;
RL   Submitted (20-DEC-2011) to the INSDC.
RL   Department of Biology, Bangor University, Deiniol Road, Bangor, Gwynedd
RL   LL57 2UW, United Kingdom
XX
DR   MD5; fe0463e91dc39c7d9cb824d2798ed68e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..565
FT                   /organism="Pasiphaea hoplocerca"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Portugal"
FT                   /lat_lon="36.55 N 9.07 W"
FT                   /specimen_voucher="JSDPX63-01"
FT                   /collection_date="11-Jul-2004"
FT                   /identified_by="Antonina dos Santos"
FT                   /PCR_primers="fwd_seq: ttttctacaaatcataaagacattgg, rev_seq:
FT                   taaacttcagggtgaccaaaaaatca"
FT                   /db_xref="taxon:1129508"
FT   gene            <1..>565
FT                   /gene="COI"
FT   CDS             <1..>565
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:H6WTD7"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:H6WTD7"
FT                   /protein_id="AEZ66605.1"
FT                   /translation="TLYFIFGAWAGMVGSALSLLIRTELGQPGTIIGNDQIYNVIVTAH
FT                   AFVMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLSSGLVEK
FT                   GVGTGWTVYPPLASTFAHTGASVDMGIFSLHLAGVSSILGAINFISTIVNMRSPGVSWD
FT                   QIPLFVWSVFLTAILLLISLPVLAG"
XX
SQ   Sequence 565 BP; 141 A; 117 C; 111 G; 196 T; 0 other;
     acattatatt ttatttttgg ggcttgagca ggaatagttg gctcagccct tagccttcta        60
     attcgaactg aattaggtca acccggtacg atcattggaa atgatcaaat ttacaatgta       120
     attgtcacag cccatgcatt cgttataatt ttttttatgg ttatgccaat tataattggg       180
     gggtttggga attgattaat ccccctaata ctgggggccc ccgatatagc ctttccccgt       240
     ataaataata taagattttg attacttcct ccttctttaa cccttctttt aaggagggga       300
     ttagtagaaa agggcgtagg aactgggtga acagtttacc ccccattagc ctctaccttt       360
     gcccatactg gggcatcggt tgatatagga attttttcac ttcacctagc cggggtttct       420
     tcaatcctag gggctattaa ttttatttct acaattgtaa acatgcggag gcccggagta       480
     tcatgagatc aaatcccact atttgtttga tcggtttttc tcacagctat tttacttctt       540
     atttcactcc cagttctagc cggag                                             565
//