ID   JQ305981; SV 1; linear; genomic DNA; STD; INV; 656 BP.
XX
AC   JQ305981;
XX
DT   08-JAN-2012 (Rel. 111, Created)
DT   08-JAN-2012 (Rel. 111, Last updated, Version 1)
XX
DE   Pasiphaea tarda voucher JSDUKdeep_12 cytochrome oxidase subunit 1 (COI)
DE   gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Pasiphaea tarda
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Pasiphaeoidea; Pasiphaeidae; Pasiphaea.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-656
RX   DOI; 10.1371/journal.pone.0019449.
RX   PUBMED; 21589909.
RA   Matzen da Silva J., Creer S., dos Santos A., Costa A.C., Cunha M.R.,
RA   Costa F.O., Carvalho G.R.;
RT   "Systematic and evolutionary insights derived from mtDNA COI barcode
RT   diversity in the Decapoda (Crustacea: Malacostraca)";
RL   PLoS One 6(5):E19449-E19449(2011).
XX
RN   [2]
RP   1-656
RA   Matzen da Silva J., Creer S., dos Santos A., Costa A.C., Cunha M.R.,
RA   Costa F.O., Carvalho G.R.;
RT   ;
RL   Submitted (20-DEC-2011) to the INSDC.
RL   Department of Biology, Bangor University, Deiniol Road, Bangor, Gwynedd
RL   LL57 2UW, United Kingdom
XX
DR   MD5; fa2d6f6452307f6fc9eceab0bd38ddc1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..656
FT                   /organism="Pasiphaea tarda"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="United Kingdom:Scotland, Rosemary, 47D9"
FT                   /lat_lon="59.21 N 10 W"
FT                   /specimen_voucher="JSDUKdeep_12"
FT                   /collected_by="Sarah Helyar"
FT                   /collection_date="19-Sep-2008"
FT                   /identified_by="Jim Drewery"
FT                   /PCR_primers="fwd_seq: ggtcaacaaatcataaagatattgg, rev_seq:
FT                   taaacttcagggtgaccaaaaaatca"
FT                   /db_xref="taxon:98099"
FT   gene            <1..>656
FT                   /gene="COI"
FT   CDS             <1..>656
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:H2FGL4"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:H2FGL4"
FT                   /protein_id="AEX10346.1"
FT                   /translation="TLYFIFGAWAGTVGSALSLLIRAELGQPGTVIGNDQIYNVIVTAH
FT                   AFVMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLCSGLVEK
FT                   GVGTGWTVYPPLASGYAHVGAAVDMGIFSLHLAGVSSILGAINFISTIVNMRSVGMSWD
FT                   RVPLFVWSVFLTAILLLISLPVLAGAITMLLTDRNLNTTFFDPAGGGDPVLYQHL"
XX
SQ   Sequence 656 BP; 171 A; 128 C; 133 G; 224 T; 0 other;
     actttatatt ttatttttgg agcttgggca gggacagttg ggtcagcctt aagtcttcta        60
     atccgagccg agttaggcca gcctggaaca gttattggaa atgatcaaat ttataatgta       120
     attgtaacag cccacgcatt tgttataatt ttttttatag taatacctat tataattgga       180
     gggtttggga attgactaat ccctttaata ttaggagccc cagatatagc attcccccgt       240
     ataaataata taagattttg actactaccc ccctctctaa ctcttctcct ttgtaggggt       300
     ttagtagaaa aaggagtggg gacagggtga actgtttacc cccctctagc gtccgggtac       360
     gcccatgttg gagctgcggt agatatagga atcttttccc ttcacttggc cggagtttct       420
     tcaattttag gagcaattaa ctttatttcc acaattgtaa atatacggag agtagggata       480
     tcgtgggacc gagttccatt atttgtttga tcagtttttt taacagctat tttactactt       540
     atttcacttc ctgttttagc gggagcaatc accatattat taaccgaccg aaatttaaac       600
     accacctttt ttgaccctgc gggagggggg gatcctgttt tataccaaca cttatt           656
//