ID   JQ034562; SV 1; linear; genomic DNA; STD; INV; 584 BP.
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AC   JQ034562;
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DT   26-MAR-2012 (Rel. 112, Created)
DT   26-MAR-2012 (Rel. 112, Last updated, Version 1)
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DE   Ciocalypta sp. DE-2012 isolate G301298 cytochrome oxidase subunit 1 (cox1)
DE   gene, partial cds; mitochondrial.
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KW   .
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OS   Ciocalypta sp. DE-2012
OC   Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Suberitida;
OC   Halichondriidae; Ciocalypta; unclassified Ciocalypta.
OG   Mitochondrion
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RN   [1]
RP   1-584
RA   Erpenbeck D., Hall K., Alvarez B., Buettner G., Sacher K., Schaetzle S.,
RA   Schuster A., Vargas S., Hooper J.N.A., Woerheide G.;
RT   "The phylogeny of halichondrid demosponges: past and present re-visited
RT   with DNA-barcoding data";
RL   Org. Divers. Evol. 12(1):57-70(2012).
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RN   [2]
RP   1-584
RA   Erpenbeck D., Hall K., Alvarez B., Buettner G., Sacher K., Schaetzle S.,
RA   Schuster A., Vargas S., Hooper J.N.A., Woerheide G.;
RT   ;
RL   Submitted (16-NOV-2011) to the INSDC.
RL   Department of Earth and Environmental Sciences & GeoBio-Center LMU,
RL   Ludwig-Maximilians-University Munich, Richard-Wagner-Str. 10, Munich 80333,
RL   Germany
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DR   MD5; 406018a3d923380934ae4fe66144b838.
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FH   Key             Location/Qualifiers
FH
FT   source          1..584
FT                   /organism="Ciocalypta sp. DE-2012"
FT                   /organelle="mitochondrion"
FT                   /isolate="G301298"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1165033"
FT   gene            <1..>584
FT                   /gene="cox1"
FT   CDS             <1..>584
FT                   /codon_start=1
FT                   /transl_table=4
FT                   /gene="cox1"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:H9BK18"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:H9BK18"
FT                   /protein_id="AFE83028.1"
FT                   /translation="MIGTAFSVLIRLELSAPGTMLGDDHLYNVIVTAHAFVMIFFLVMP
FT                   VMIGGFGNWFVPLYIGSPDMAFPRLNNISFWVLPPSLTLLLGSAFVEQGAGTGWTVYPP
FT                   LASIQTHSGGSVDMVIFSLHLAGISSILGAMNFITTILNMRAPGITMDRMPLFVWSILI
FT                   TAFLLLLSLPVLAGAITMLLTDRNFNTTFFDP"
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SQ   Sequence 584 BP; 173 A; 93 C; 118 G; 200 T; 0 other;
     atgatcggaa cagcatttag tgtgctaatt agattagaac tttcggcacc gggaacaatg        60
     ctaggggatg atcatttata taatgtaata gtaacagcac atgcttttgt aatgatattt       120
     ttcttagtaa tgccagttat gatcggaggg tttggtaatt gatttgtacc attatatata       180
     ggttctccag atatggcttt cccaagatta aataatatta gtttttgggt gttacctcca       240
     tcattaacat tattattagg ttcagcattt gtagaacagg gggcaggaac aggatgaacg       300
     gtatatcctc ccttagcaag catacaaaca cattcagggg ggtcggttga catggttatc       360
     tttagtcttc atttagcagg gatttcttca atattggggg ccatgaattt tattacaaca       420
     atattgaaca tgcgggcacc aggaataaca atggatagaa tgccactatt tgtgtgatca       480
     attttaataa ctgcattctt actattattg tcattaccag tattagctgg ggctattaca       540
     atgcttctga cagacagaaa ttttaatact actttctttg atcc                        584
//