ID   JN418670; SV 1; linear; genomic DNA; STD; PLN; 1386 BP.
XX
AC   JN418670;
XX
DT   06-NOV-2011 (Rel. 110, Created)
DT   06-NOV-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Mayamaea atomus var. permitis strain (Wes2)f ribulose-1,5-bisphosphate
DE   carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast.
XX
KW   .
XX
OS   Mayamaea permitis
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae; Mayamaea.
OG   Plastid:Chloroplast
XX
RN   [1]
RP   1-1386
RX   PUBMED; 21930222.
RA   Souffreau C., Verbruggen H., Wolfe A.P., Vanormelingen P., Siver P.A.,
RA   Cox E.J., Mann D.G., Vijver B.V., Sabbe K., Vyverman W.;
RT   "A time-calibrated multi-gene phylogeny of the diatom genus Pinnularia";
RL   Mol. Phylogenet. Evol. 61(3):866-879(2011).
XX
RN   [2]
RP   1-1386
RA   Souffreau C.;
RT   ;
RL   Submitted (26-JUL-2011) to the INSDC.
RL   Biology-Protistology and Aquatic Ecology, Ghent University, Krijgslaan
RL   241-S8, Gent 9000, Belgium
XX
DR   MD5; bd31e4e186a1896a66489ba6665d340b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Mayamaea permitis"
FT                   /organelle="plastid:chloroplast"
FT                   /strain="(Wes2)f"
FT                   /variety="permitis"
FT                   /mol_type="genomic DNA"
FT                   /country="Belgium"
FT                   /collected_by="C. Souffreau"
FT                   /collection_date="03-Mar-2008"
FT                   /identified_by="Bart Van de Vijver"
FT                   /note="authority: Mayamaea atomus (Kutzing) Lange-Bertalot
FT                   var. permitis"
FT                   /db_xref="taxon:1302819"
FT   gene            <1..>1386
FT                   /gene="rbcL"
FT   CDS             <1..>1386
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="rbcL"
FT                   /product="ribulose-1,5-bisphosphate carboxylase/oxygenase
FT                   large subunit"
FT                   /EC_number="4.1.1.39"
FT                   /note="rubisco"
FT                   /db_xref="GOA:G8H6U4"
FT                   /db_xref="InterPro:IPR000685"
FT                   /db_xref="InterPro:IPR017443"
FT                   /db_xref="InterPro:IPR020878"
FT                   /db_xref="InterPro:IPR020888"
FT                   /db_xref="InterPro:IPR033966"
FT                   /db_xref="InterPro:IPR036376"
FT                   /db_xref="InterPro:IPR036422"
FT                   /db_xref="UniProtKB/TrEMBL:G8H6U4"
FT                   /protein_id="AER42051.1"
FT                   /translation="MGYWDASYVVKTTDVLALFRVTPQPGVDPVEAAAAVAGESSTATW
FT                   TVVWTDLLTACDRYRAKAYRVDPVPNTTDQYFAFIAYECDLFEEGSLANITASIIGNVF
FT                   GFKAVSALRLEDMRIPHSYLKTFQGPATGIVVERERLNKYGTPLLGATVKPKLGLSGKN
FT                   YGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYCMEGINRAAAATGEIKGSYLNIT
FT                   AGTMEEVYARAEYAKSLGSVIVMIDLVMGYTAIQSAAIWSRANDMLLHLHRAGNSAYAR
FT                   QKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMIKGFYDTLRLTNLDVNLPYGL
FT                   FFEMNWASLRKCMPVASGGIHCGQMHQLVHYLGDDVVLQFGGGTIGHPDGIQAGATANR
FT                   VALESMVMARNEGADYFNSEVGPKILRDAARTCGPLQTALDLWKDISFNYTSTDTADFV
FT                   ETAT"
XX
SQ   Sequence 1386 BP; 400 A; 252 C; 296 G; 438 T; 0 other;
     atgggttact gggatgcttc atacgtagta aaaactactg atgttcttgc attattccgt        60
     gttacaccac aaccaggtgt ggatccagta gaagctgctg cagctgttgc tggtgaatct       120
     tctactgcta catggacagt tgtatggact gatttattaa cagcttgtga ccgttaccgt       180
     gctaaagctt accgtgtaga tccagttcca aacactacag atcaatactt tgctttcatt       240
     gcatatgaat gtgatttatt tgaagaaggt tctttagcta acattacagc gtctatcatt       300
     ggtaacgtat tcggttttaa agccgtatct gctttacgtt tagaagatat gcgtattccg       360
     cattcttatt taaaaacatt ccaaggtcct gctacaggta tcgtggtaga acgtgagcgt       420
     ttaaacaaat atggtactcc attattaggt gcaacagtaa aaccgaaatt aggtttatct       480
     ggtaaaaact acggccgtgt agtgtacgaa ggtttaaaag gtggtttaga cttcttaaaa       540
     gatgacgaaa acatcaactc acaaccattc atgcgttgga gagaacgttt cttatactgt       600
     atggaaggta ttaaccgtgc agcagcagct acaggtgaaa ttaaaggttc atacttaaac       660
     atcactgctg gtacaatgga agaagtttat gctcgtgcag aatacgctaa aagccttggt       720
     tctgtaatcg ttatgatcga tttagttatg ggctatacag caatccaaag tgctgcaatc       780
     tggtctcgtg caaacgacat gcttttacat ttacaccgtg ctggtaactc tgcttacgct       840
     cgtcaaaaaa atcatggtat caacttccgt gttatttgta aatggatgcg tatgtctggt       900
     gtagatcata tccacgctgg tacagttgtt ggtaaattag aaggtgatcc tttaatgatt       960
     aaaggtttct acgatacttt acgtttaact aacttagacg ttaacttacc gtacggttta      1020
     ttcttcgaaa tgaactgggc tagtttacgt aaatgtatgc ctgttgcatc aggtggtatc      1080
     cactgtggtc aaatgcacca attagtacat tacttaggtg atgacgtagt attacaattc      1140
     ggtggtggta caattggtca cccagatggt atccaagcag gtgctacagc taaccgtgtt      1200
     gctttagaat ctatggtaat ggctcgtaac gaaggtgctg actacttcaa tagtgaagtg      1260
     ggtccaaaaa tcttacgtga tgctgctaga acttgtggtc ctttacaaac agctttagat      1320
     ttatggaaag atattagttt caactataca tctacagata cagcagattt cgttgaaact      1380
     gcaaca                                                                 1386
//