ID   JN025145; SV 1; linear; genomic DNA; STD; VRT; 646 BP.
XX
AC   JN025145;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus tallapoosae voucher NAFF4421 cytochrome oxidase subunit 1 (COI)
DE   gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus tallapoosae
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-646
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-646
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; 733df2178c6e2f461fa323c5429d4da9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Cottus tallapoosae"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Alabama, Cleburne, Tallapoosa River"
FT                   /lat_lon="33.52 N 85.41 W"
FT                   /specimen_voucher="NAFF4421"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1046054"
FT   gene            <1..>646
FT                   /gene="COI"
FT   CDS             <1..>646
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWT5"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWT5"
FT                   /protein_id="AEK01769.1"
FT                   /translation="LYLVFGAWAGMVXTALSLLIRAELSQPGALLGDXQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVXSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYP"
XX
SQ   Sequence 646 BP; 143 A; 185 C; 120 G; 194 T; 4 other;
     cctatatcta gtatttggtg cttgagccgg aatagtagnc acagctttaa gcctcctaat        60
     tcgggcngaa ttaagtcaac ccggcgccct tttgggggac natcagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccgatta tgatcggagg       180
     tttcgggaac tggctcgttc ccctaatgat tggcgctcct gatatagcct ttcctcgaat       240
     gaataatatg agcttttgac ttcttccccc atctttttta ctcctccttg cctcttcggg       300
     agtcgaagca ggggccggaa ccggatgaac agtttatcca cccctcgccg gaaatctcgc       360
     ccacgcagga gcttctgttg acctaacaat cttctccctt cacctagcag gtatctcctc       420
     tattcttggg gcaatcaact ttatcacaac tatcattaat ataaaacccc ctgctatttc       480
     acaataccag accccgctat ttgtgnggtc cgttcttatt actgctgtgc tgctgcttct       540
     ctccctcccc gttcttgccg ccggcatcac aatactcctg acagaccgaa atcttaacac       600
     caccttcttt gaccctgccg gaggagggga cccaatcctt taccca                      646
//