ID   JN025134; SV 1; linear; genomic DNA; STD; VRT; 646 BP.
XX
AC   JN025134;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus ricei voucher NAFF 3970 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus ricei (spoonhead sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-646
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-646
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; 9d90c4188e1991c954c4d33b88b2becb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..646
FT                   /organism="Cottus ricei"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Lake Superior, Chequamegon Bay"
FT                   /specimen_voucher="NAFF 3970"
FT                   /collected_by="Milt Hoff"
FT                   /collection_date="09-Sep-1999"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304288"
FT   gene            <1..>646
FT                   /gene="COI"
FT   CDS             <1..>646
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWS4"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWS4"
FT                   /protein_id="AEK01758.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ"
XX
SQ   Sequence 646 BP; 146 A; 195 C; 120 G; 185 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagctttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taatcggagg       180
     tttcgggaac tggctagttc ccctaatgat cggcgctcct gatatggcct ttcctcgaat       240
     gaataatatg agcttttgac tccttccccc atctttttta ctcctccttg cctcttcggg       300
     ggtcgaagca ggtgccggaa ccggatgaac agtctacccg cccctcgccg gaaacctcgc       360
     ccacgcagga gcctctgttg acctgacaat cttctccctt cacctagcag gtatctcctc       420
     tattcttggg gcaatcaact ttatcacaac tatcatcaat atgaaacccc ctgctatctc       480
     acaataccag accccgctct tcgtatgatc tgttcttatt actgctgtcc tactgcttct       540
     ttctctcccc gtacttgccg ccggcatcac aatgctcctg acagaccgaa accttaacac       600
     caccttcttt gaccctgccg gagggggaga cccaatcctt taccaa                      646
//