ID   JN025105; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   JN025105;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus hypselurus voucher NAFF 948 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus hypselurus (Ozark sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-652
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; 5726dff96174f4a91801ce6854ae5337.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus hypselurus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Missouri, Phelps, Little Piney Creek"
FT                   /lat_lon="37.92 N 91.97 W"
FT                   /specimen_voucher="NAFF 948"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:147211"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWP8"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWP8"
FT                   /protein_id="AEK01729.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 151 A; 191 C; 116 G; 194 T; 0 other;
     cctttatcta gtatttggtg cttgagccgg aatagtaggc acagctttaa gcctactaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taatcggagg       180
     tttcgggaac tgactcgtcc ccctaatgat tggcgctcct gacatggcct ttcctcgaat       240
     aaataatatg agcttttgac ttcttccccc atctttttta ctcctccttg cctcttcggg       300
     agtcgaagcg ggggccggaa ccggatgaac agtctaccca cccctcgccg gaaaccttgc       360
     ccacgcagga gcctctgttg acctaacaat cttctccctt cacttggcag gtatctcctc       420
     tattctggga gcaatcaact ttatcacaac tattattaac ataaaacccc ctgctatttc       480
     acaataccag acccctctct ttgtgtggtc tgttcttatt actgccgtac tactacttct       540
     ttccctccct gttcttgccg ccggtatcac aatactcctg acagaccgaa atcttaacac       600
     caccttcttt gaccctgccg gaggagggga cccaatcctt taccaacatc tc               652
//