ID   JN025034; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   JN025034;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus beldingii voucher NAFF 871 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus beldingii
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-652
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; eebe2201d288d038f74704ed77b5a428.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus beldingii"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Idaho, Idaho, Clearwater River"
FT                   /lat_lon="46.17 N 116 W"
FT                   /specimen_voucher="NAFF 871"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304265"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWH4"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWH4"
FT                   /protein_id="AEK01658.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVVVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 150 A; 189 C; 119 G; 194 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtgggc acagctttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggagccct tttgggggac gaccagattt ataatgtagt       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taattggagg       180
     tttcgggaac tgactcgttc ccctaatgat tggcgctcct gatatggcct ttcctcgaat       240
     gaataatatg agcttttgac ttcttccacc ctcttttcta ctcctccttg cctcttcggg       300
     ggtcgaagca ggggccggaa ccgggtggac agtctacccc ccactcgcag gaaacctcgc       360
     ccacgcagga gcctctgttg acctaacaat cttctccctt cacctagcag gtatttcctc       420
     tattcttgga gcaattaatt ttatcacaac tatcattaat ataaaacccc ctgctatctc       480
     acaataccag accccactct tcgtatgatc tgttcttatt actgctgtcc ttctgcttct       540
     ctctctcccc gtacttgccg ccgggatcac aatgctcctg acagaccgaa atcttaacac       600
     cacctttttt gaccctgccg gaggaggaga cccaatcctt tatcaacacc tc               652
//