ID   JN025029; SV 1; linear; genomic DNA; STD; VRT; 649 BP.
XX
AC   JN025029;
XX
PR   Project:PRJNA37833;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   06-NOV-2011 (Rel. 110, Last updated, Version 3)
XX
DE   Cottus beldingii voucher NAFF4432 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Cottus beldingii
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-649
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-649
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; 179d6281a35d6f602bf744c33a172d0e.
XX
CC   ##International Barcode of Life (iBOL)Data-START##
CC   Barcode Index Number :: BOLD:AAC4472
CC   Order Assignment     :: Scorpaeniformes
CC   iBOL Working Group   :: iBOL:WG1.1
CC   iBOL Release Status  :: Phase 2
CC   ##International Barcode of Life (iBOL)Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..649
FT                   /organism="Cottus beldingii"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Idaho, Twin Falls, Snake River"
FT                   /lat_lon="42.19 N 114.91 W"
FT                   /specimen_voucher="NAFF4432"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304265"
FT   gene            <1..>649
FT                   /gene="COI"
FT   CDS             <1..>649
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWG9"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWG9"
FT                   /protein_id="AEK01653.1"
FT                   /translation="YLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAF
FT                   VMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGA
FT                   GTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQT
FT                   PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 649 BP; 148 A; 184 C; 123 G; 194 T; 0 other;
     atatctagta tttggtgcct gagccgggat agtaggcaca gctttaagcc tcctaattcg        60
     agcagaacta agccaacccg gagccctttt gggggacgac cagatttata atgtgattgt       120
     tacagcccat gctttcgtaa taattttctt tatagtaata ccaattataa ttggaggttt       180
     cgggaactga ctcgttcccc taatgattgg cgctcctgat atggcctttc ctcgaatgaa       240
     taatatgagc ttttgacttc ttccaccatc ttttttactc cttcttgcct cttcgggggt       300
     cgaagcaggg gccggaaccg ggtggacggt ttaccctcca ctcgcaggaa acctcgccca       360
     cgcaggagcc tctgttgacc taacaatctt ctccctccac ctagcaggta tttcctctat       420
     tcttggagca atcaacttta tcacaactat cattaatatg aaaccccctg ctatctcaca       480
     atatcagacc ccgctcttcg tatgatctgt tcttattact gctgtcctac tgcttctttc       540
     cctccccgta cttgccgccg ggattacaat gctcctgaca gaccgaaatc ttaacaccac       600
     cttctttgac cctgccgggg gaggagaccc aatcctttat caacatctc                   649
//