ID   JN025027; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   JN025027;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus beldingii voucher NAFF 4670 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus beldingii
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-652
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; a9f6580a3867ffcb8099ea2426d39679.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus beldingii"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Nevada, Elko, Marys River at bridge ca. 12 mi
FT                   off Oneil Deeth Co Rd., ca. 20 mi SWW of Henry"
FT                   /specimen_voucher="NAFF 4670"
FT                   /collected_by="DA Neely"
FT                   /collection_date="06-Aug-2001"
FT                   /identified_by="D. A. Neely"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304265"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWH1"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWH1"
FT                   /protein_id="AEK01651.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 153 A; 183 C; 120 G; 196 T; 0 other;
     cctatatcta gtatttggtg cctgagccgg aatagtaggc acagctttaa gccttctaat        60
     tcgagcagaa ctaagccaac ccggagccct tttaggggac gaccagattt ataatgtaat       120
     tgtcacagcc catgctttcg taataatttt ctttatagta ataccaatta taattggagg       180
     tttcgggaac tgactcgttc ccctaatgat tggcgctcct gatatggcct ttcctcgaat       240
     gaataatatg agcttttgac ttcttccacc atctttttta ctcctccttg cctcttcggg       300
     ggtcgaagca ggggccggaa ccgggtggac ggtttatccc ccactcgcag gaaacctcgc       360
     ccacgcagga gcctctgttg acctaacaat tttctccctt cacctagcag gtatttcctc       420
     tattctgggg gcaatcaact ttatcacaac tatcattaat ataaaacccc ctgctatttc       480
     acaataccaa accccgctct tcgtatgatc tgttctaatt actgctgttc tactgcttct       540
     ttccctccct gtacttgccg ccgggattac aatgctcctg acagaccgaa atcttaacac       600
     caccttcttt gaccctgccg gagggggaga cccaatcctt tatcaacatc tc               652
//