ID   JN025012; SV 1; linear; genomic DNA; STD; VRT; 613 BP.
XX
AC   JN025012;
XX
DT   19-JUL-2011 (Rel. 109, Created)
DT   19-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cottus bairdii voucher NAFF4442 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus bairdii (mottled sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-613
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-613
RA   April J., Mayden R.L., Hanner R., Bernatchez L.;
RT   ;
RL   Submitted (26-MAY-2011) to the INSDC.
RL   Institut de Biologie Integrative et des Systemes (IBIS), Universite Laval,
RL   1030 Avenue de la Medecine, Quebec, Quebec G1V 0A6, Canada
XX
DR   MD5; 73a9fe27b448bb9e4cb54f37c4a5c691.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..613
FT                   /organism="Cottus bairdii"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Kentucky, Lewis, Kinniconnick Creek"
FT                   /lat_lon="38.46 N 83.46 W"
FT                   /specimen_voucher="NAFF4442"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:147208"
FT   gene            <1..>613
FT                   /gene="COI"
FT   CDS             <1..>613
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:G1DWF2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:G1DWF2"
FT                   /protein_id="AEK01636.1"
FT                   /translation="GTALSLLIXAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIM
FT                   IGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLA
FT                   GNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQTPLFVWSVLITA
FT                   VLLLLSLPVSAAGITMLLTDRNLNTTFFDPAGGGDPILYQH"
XX
SQ   Sequence 613 BP; 142 A; 186 C; 105 G; 179 T; 1 other;
     ggcacagctt taagcctcct aattcnagca gaactaagcc aacccggcgc ccttttgggg        60
     gacgaccaga tttataatgt aattgttaca gcccatgctt ttgtaataat tttctttata       120
     gtaataccaa ttataatcgg aggtttcggg aactgactcg ttcccctaat gattggcgct       180
     cctgatatgg cctttcctcg aataaataat atgagttttt gacttcttcc cccatctttt       240
     ttactcctcc ttgcctcttc gggagtcgaa gcaggggccg gaaccggatg aacagtctac       300
     ccgccccttg ccggaaacct cgcccacgca ggagcctctg ttgacctaac aatcttctcc       360
     cttcacctag caggtatctc ctctattctt ggggcaatca actttatcac aactattatt       420
     aacataaaac cccctgctat ctcacaatac cagaccccgc tctttgtatg atctgttctt       480
     attactgccg tcctactgct tctttccctc cccgtttctg ccgccggcat cacaatactc       540
     ctgacagacc gaaatcttaa caccaccttc tttgaccccg ccggaggagg ggacccaatc       600
     ctttatcaac atc                                                          613
//