ID   JF320883; SV 1; linear; genomic DNA; STD; VRT; 767 BP.
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AC   JF320883;
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DT   17-DEC-2012 (Rel. 115, Created)
DT   17-DEC-2012 (Rel. 115, Last updated, Version 1)
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DE   Clinus spatulatus isolate clinid54 rhodopsin gene, partial cds.
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KW   .
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OS   Clinus spatulatus (Bot River klipfish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Blenniimorphae; Blenniiformes; Blennioidei; Clinidae; Clinus.
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RN   [1]
RP   1-767
RA   Holleman W., von der Heyden S., Zsilavecz G.;
RT   "Delineating the fishes of the Clinus superciliosus species complex in
RT   southern African waters (Blennioidei: Clinidae: Clinini), with the
RT   validation of Clinus arborescens Gilchrist & Thompson, 1908 and Clinus
RT   ornatus Gilchrist & Thompson, 1908, and with descriptions of two new
RT   species";
RL   Zool. J. Linn. Soc. 166(4):827-853(2012).
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RN   [2]
RP   1-767
RA   von der Heyden S., Zsilavecz G., Holleman W.;
RT   ;
RL   Submitted (14-FEB-2011) to the INSDC.
RL   Botany and Zoology, Stellenbosch University, Private Bag X1, Matieland,
RL   Stellenbosch, Western Cape 7602, South Africa
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DR   MD5; 23cf8daa9283a905499b141b77c26c66.
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FH   Key             Location/Qualifiers
FH
FT   source          1..767
FT                   /organism="Clinus spatulatus"
FT                   /isolate="clinid54"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="B324"
FT                   /db_xref="taxon:984772"
FT   mRNA            <1..>767
FT                   /product="rhodopsin"
FT   CDS             <1..>767
FT                   /codon_start=2
FT                   /product="rhodopsin"
FT                   /db_xref="GOA:K9JVM4"
FT                   /db_xref="InterPro:IPR000276"
FT                   /db_xref="InterPro:IPR000732"
FT                   /db_xref="InterPro:IPR001760"
FT                   /db_xref="InterPro:IPR017452"
FT                   /db_xref="InterPro:IPR027430"
FT                   /db_xref="UniProtKB/TrEMBL:K9JVM4"
FT                   /protein_id="ADY62479.1"
FT                   /translation="INFLTLYVTLEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTS
FT                   MHGYFVLGRLGCNLEGFFATLGGEIALWSLVVLAVERWMVVCKPISNFRFGENHAIMGL
FT                   AFTWVMASACAVPPLLGWSRYIPEGMQCSCGVDYYTRAEGFNNESFVIYMFVCHFCIPL
FT                   AIVFFCYGRLLCAVKEAAAAQQESETTQRAEREVTRMVVIMVFAFLTCWLPYASVAWFI
FT                   FTHQGTEFGPLFMTVPAFFAKSSSIYNPMIYIC"
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SQ   Sequence 767 BP; 132 A; 259 C; 196 G; 179 T; 1 other;
     catcaacttc ctcactctct acgtcaccct cgaacacaag aagctgcgaa cccctctaaa        60
     ctacatcctg ctgaacctcg cggtggccga cctcttcatg gtgttcggag gattcaccac       120
     cacgatgtac acctccatgc acggctactt cgtcctcggg cgcctgggct gcaacctgga       180
     aggattcttt gccaccctgg gcggtgagat cgcgctctgg tctctggtcg ttctggccgt       240
     cgagaggtgg atggtcgtct gcaagcccat cagcaacttc cgcttcgggg agaaccacgc       300
     catcatgggs ctggccttca cctgggtgat ggcctccgcc tgcgccgtgc ccccgctgtt       360
     gggctggtcc cgttacatcc ccgagggcat gcagtgctca tgtggagtcg actactacac       420
     gcgcgccgag ggattcaaca acgagtcctt cgtgatctac atgttcgttt gccacttctg       480
     catccctctt gccatcgtgt tcttctgcta cggccgtctg ctctgcgccg tcaaggaggc       540
     cgccgccgcc cagcaggagt ccgagaccac ccagagggcc gagagggagg tcacccgcat       600
     ggtggtcatc atggtgttcg ccttcctcac ctgctggttg ccctacgcca gtgtggcatg       660
     gttcattttc acacaccagg gcactgaatt cggacccctc ttcatgaccg tcccagcctt       720
     ctttgccaag agttcctcca tctacaatcc aatgatctac atctgca                     767
//