ID   HQ971431; SV 1; linear; genomic DNA; STD; VRT; 607 BP.
XX
AC   HQ971431;
XX
PR   Project:PRJNA37833;
XX
DT   16-FEB-2011 (Rel. 107, Created)
DT   25-SEP-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Cottus leiopomus voucher NAFF 926 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus leiopomus (Wood River sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-607
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-607
RG   International Barcode of Life (iBOL)
RA   ;
RT   "iBOL Data Release";
RL   Unpublished.
XX
RN   [3]
RP   1-607
RG   International Barcode of Life (iBOL)
RA   ;
RT   ;
RL   Submitted (24-JAN-2011) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 50 Stone Rd West,
RL   Guelph, Ontario N1G2W1, Canada
XX
DR   MD5; c69a6bc93d6d4c5cca392ee35c5cd39c.
XX
CC   ##International Barcode of Life (iBOL)Data-START##
CC   Barcode Index Number :: BOLD:AAJ5625
CC   Order Assignment     :: Scorpaeniformes
CC   iBOL Working Group   :: iBOL:WG1.8
CC   iBOL Release Status  :: Phase 2
CC   ##International Barcode of Life (iBOL)Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..607
FT                   /organism="Cottus leiopomus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Idaho, Blaine, Big Wood River"
FT                   /lat_lon="43.46 N 114.26 W"
FT                   /specimen_voucher="NAFF 926"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304282"
FT   gene            <1..>607
FT                   /gene="COI"
FT   CDS             <1..>607
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:F1I2I5"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:F1I2I5"
FT                   /protein_id="ADW87391.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITXIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTARNLNTTF"
XX
SQ   Sequence 607 BP; 139 A; 172 C; 111 G; 184 T; 1 other;
     cttatatcta gtatttggtg cctgagccgg aatagtaggc acagctttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggagccct tttgggggac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taattggagg       180
     tttcgggaac tgactcgttc ccctaataat tggcgctcct gatatggcct ttcctcggat       240
     gaataatatg agcttttgac ttcttccacc atctttttta ctcctccttg cctcttcggg       300
     ggtcgaagca ggggccggaa ccgggtggac ggtttacccc ccactcgcag gaaacctcgc       360
     ccacgcagga gcctctgttg acctaacaat tttctccctt cacctggcag gtatttcctc       420
     tattcttgga gcaatcaact ttatcacaas tatcattaat atgaaacccc ctgctatttc       480
     acaataccag accccgctct tcgtatgatc tgttcttatt actgccgtcc tactacttct       540
     ttccctcccc gtacttgccg ccgggattac aatgctcctg acagcccgaa atcttaacac       600
     caccttc                                                                 607
//