ID   HQ631045; SV 1; linear; genomic DNA; STD; FUN; 582 BP.
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AC   HQ631045;
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DT   16-JAN-2011 (Rel. 107, Created)
DT   02-NOV-2011 (Rel. 110, Last updated, Version 4)
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DE   Capnodium sp. TMS-2011 voucher SC11d10p11-8 18S ribosomal RNA gene, partial
DE   sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and
DE   internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA
DE   gene, partial sequence.
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KW   .
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OS   Capnodium sp. TMS-2011
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Dothideomycetidae; Capnodiales; Capnodiaceae; Capnodium;
OC   unclassified Capnodium.
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RN   [1]
RP   1-582
RX   DOI; 10.1128/AEM.02996-10.
RX   PUBMED; 21685162.
RA   Shrestha P., Szaro T.M., Bruns T.D., Taylor J.W.;
RT   "Systematic search for cultivatable fungi that best deconstruct cell walls
RT   of Miscanthus and sugarcane in the field";
RL   Appl. Environ. Microbiol. 77(15):5490-5504(2011).
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RN   [2]
RP   1-582
RA   Shrestha P., Szaro T.M., Bruns T.D., Taylor J.W.;
RT   ;
RL   Submitted (17-NOV-2010) to the INSDC.
RL   Energy Biosciences Institute, University of California, 321 Koshland Hall,
RL   Berkeley, CA 94720-3102, USA
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DR   MD5; 61c2c4f7985d852a3152dca6ea97a6d2.
DR   EuropePMC; PMC3147484; 21685162.
DR   RFAM; RF00002; 5_8S_rRNA.
DR   SILVA-LSU; HQ631045.
DR   Unite; 186936.
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FH   Key             Location/Qualifiers
FH
FT   source          1..582
FT                   /organism="Capnodium sp. TMS-2011"
FT                   /host="Saccharum officinarum"
FT                   /mol_type="genomic DNA"
FT                   /lat_lon="30.07 N 90.7 W"
FT                   /specimen_voucher="SC11d10p11-8"
FT                   /collected_by="T.D. Bruns"
FT                   /collection_date="22-Jan-2009"
FT                   /note="PCR_primers=fwd_name: ITS1F, rev_name: ITS4"
FT                   /db_xref="taxon:942763"
FT   misc_RNA        <1..>582
FT                   /note="contains 18S ribosomal RNA, internal transcribed
FT                   spacer 1, 5.8S ribosomal RNA, internal transcribed spacer
FT                   2, and 28S ribosomal RNA"
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SQ   Sequence 582 BP; 145 A; 156 C; 148 G; 133 T; 0 other;
     tcttggtcat ttagaggaag taaaagtcgt aacaaggtct ccgtaggtga acctgcggag        60
     ggatcattaa cgagttaggg cctccgtgcc cgacctccaa ccctcttgta tcacaaaacc       120
     tcgttgcctc gggggtggcc ctgcctcgcg gcgggccccc cggaggacca ctcaaacact       180
     gcattttagt gtcgtctgag ttagatttta aatgaaatca aaactttcaa caacggatct       240
     cttggttctg gcatcgatga agaacgcagc gaaatgcgat aagtaatgtg aattgcagaa       300
     ttcagtgaat catcgaatct ttgaacgcat attgcgcccc ttggtattcc ttggggcaca       360
     cctgttcgag cgtcatttca ccaatcaagc ctcgcttggt gttgggcgat gcgcatgtcg       420
     cacgcctcaa atgccccggc cgagcagtct ctcacccggc gtcgtggaaa cataccgcta       480
     cggagacgag acctgcccgc gccgcagaaa acctcatcta aaggttgacc tcggatcagg       540
     tggggatacc cgctgaactt aagcatatca ataacggagg aa                          582
//