ID   HQ579025; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   HQ579025;
XX
PR   Project:PRJNA37833;
XX
DT   06-DEC-2010 (Rel. 107, Created)
DT   25-SEP-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Cottus tenuis voucher NAFF 921 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus tenuis (slender sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-652
RG   International Barcode of Life (iBOL)
RA   ;
RT   "iBOL Data Release";
RL   Unpublished.
XX
RN   [3]
RP   1-652
RG   International Barcode of Life (iBOL)
RA   ;
RT   ;
RL   Submitted (03-NOV-2010) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 50 Stone Rd West,
RL   Guelph, Ontario N1G2W1, Canada
XX
DR   MD5; 3baa0ee0a273a0ba63dd37a200918763.
XX
CC   ##International Barcode of Life (iBOL)Data-START##
CC   Barcode Index Number :: BOLD:AAE4084
CC   Order Assignment     :: Scorpaeniformes
CC   iBOL Working Group   :: iBOL:WG1.1
CC   iBOL Release Status  :: Phase 2
CC   ##International Barcode of Life (iBOL)Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus tenuis"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Oregon, Klamath, Upper Klamath Lake"
FT                   /lat_lon="42.39 N 121.82 W"
FT                   /specimen_voucher="NAFF 921"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1046055"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:E5PKZ0"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:E5PKZ0"
FT                   /protein_id="ADR14814.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 152 A; 204 C; 115 G; 181 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagccttaa gcctcctaat        60
     ccgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataacgtgat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taattggggg       180
     tttcgggaac tgactcatcc ccctaatgat cggcgcccct gatatggcct ttcctcgaat       240
     aaacaatatg agcttttgac ttcttccccc atcttttctc ctcctcctag cctcttcggg       300
     agtcgaagcg ggggccggaa ccggatgaac agtttaccca cccctcgccg gaaacctcgc       360
     ccacgcaggg gcctctgttg acctaacaat cttctccctt cacctagcag gtatttcctc       420
     tatccttgga gcaatcaact ttatcacaac tatcattaat ataaaacccc ctgccatttc       480
     tcaataccag acccctctat tcgtatgatc tgttctgatt actgctgttc tactgcttct       540
     ttctctcccc gtactcgccg ccggcatcac aatactccta acagaccgaa accttaacac       600
     caccttcttt gaccctgccg gaggaggaga cccaatcctc taccagcacc tc               652
//