ID   HQ557327; SV 1; linear; genomic DNA; STD; VRT; 609 BP.
XX
AC   HQ557327;
XX
PR   Project:PRJNA37833;
XX
DT   02-MAR-2011 (Rel. 108, Created)
DT   25-SEP-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Cottus ricei voucher NAFF 3971 cytochrome oxidase subunit 1 (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus ricei (spoonhead sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RP   1-609
RX   DOI; 10.1073/pnas.1016437108.
RX   PUBMED; 21670289.
RA   April J., Mayden R.L., Hanner R.H., Bernatchez L.;
RT   "Genetic calibration of species diversity among North America's freshwater
RT   fishes";
RL   Proc. Natl. Acad. Sci. U.S.A. 108(26):10602-10607(2011).
XX
RN   [2]
RP   1-609
RG   International Barcode of Life (iBOL)
RA   ;
RT   "iBOL Data Release";
RL   Unpublished.
XX
RN   [3]
RP   1-609
RG   International Barcode of Life (iBOL)
RA   ;
RT   ;
RL   Submitted (02-NOV-2010) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 50 Stone Rd West,
RL   Guelph, Ontario N1G2W1, Canada
XX
DR   MD5; 283d6bcf0cd7e1b8ffd003dfc0714952.
XX
CC   ##International Barcode of Life (iBOL)Data-START##
CC   Barcode Index Number :: BOLD:AAC3539
CC   Order Assignment     :: Scorpaeniformes
CC   iBOL Working Group   :: iBOL:WG1.1
CC   iBOL Release Status  :: Phase 2
CC   ##International Barcode of Life (iBOL)Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..609
FT                   /organism="Cottus ricei"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Lake Superior, Chequamegon Bay"
FT                   /specimen_voucher="NAFF 3971"
FT                   /collected_by="Milt Hoff"
FT                   /collection_date="09-Sep-1999"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa"
FT                   /PCR_primers="fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:304288"
FT   gene            <1..>609
FT                   /gene="COI"
FT   CDS             <1..>609
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:F1CTW5"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:F1CTW5"
FT                   /protein_id="ADY15759.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVXAAGITMLLTDRNLNTTF"
XX
SQ   Sequence 609 BP; 137 A; 184 C; 110 G; 177 T; 1 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagctttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taatcggagg       180
     tttcgggaac tggctagtcc ccctaatgat cggcgctcct gatatggcct ttcctcgaat       240
     gaataatatg agcttttgac tccttccccc atctttttta ctcctccttg cctcttcggg       300
     ggtcgaagca ggtgccggaa ccggatgaac agtctacccg cccctcgccg gaaacctcgc       360
     ccacgcagga gcctctgttg acctgacaat cttctccctt cacctagcag gtatctcctc       420
     tattcttggg gcaatcaact ttatcacaac tatcatcaat atgaaacccc ctgctatctc       480
     acaataccag accccgctct tcgtatgatc tgttcttatt actgctgtcc tactgcttct       540
     ttctctcccc gtacntgccg ccggcatcac aatgctcctg acagaccgaa accttaacac       600
     caccttctt                                                               609
//