ID   FJ616803; SV 1; linear; genomic DNA; STD; VRT; 802 BP.
XX
AC   FJ616803;
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DT   03-JUN-2009 (Rel. 101, Created)
DT   14-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE   Pomacentrus albicaudatus voucher FMNH Bus03-20 T-378 recombinase activating
DE   protein 2 (rag-2) gene, partial cds.
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KW   .
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OS   Pomacentrus albicaudatus (whitefin damsel)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Pomacentridae; Pomacentrus.
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RN   [1]
RP   1-802
RX   DOI; 10.1016/j.ympev.2008.12.010.
RX   PUBMED; 19135160.
RA   James Cooper W., Smith L.L., Westneat M.W.;
RT   "Exploring the radiation of a diverse reef fish family: phylogenetics of
RT   the damselfishes (Pomacentridae), with new classifications based on
RT   molecular analyses of all genera";
RL   Mol. Phylogenet. Evol. 52(1):1-16(2009).
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RN   [2]
RP   1-802
RA   Cooper W.J., Smith L.L., Westneat M.W.;
RT   ;
RL   Submitted (08-JAN-2009) to the INSDC.
RL   Department of Zoology, Field Museum of Natural History, 1400 South Lake
RL   Shore Drive, Chicago, IL 60605, USA
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DR   MD5; b171d3aa63a8bd1d9c910a37147e71a2.
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FH   Key             Location/Qualifiers
FH
FT   source          1..802
FT                   /organism="Pomacentrus albicaudatus"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="FMNH Bus03-20 T-378"
FT                   /db_xref="taxon:646027"
FT   gene            <1..>802
FT                   /gene="rag-2"
FT   mRNA            <1..>802
FT                   /gene="rag-2"
FT                   /product="recombinase activating protein 2"
FT   CDS             <1..>802
FT                   /codon_start=2
FT                   /gene="rag-2"
FT                   /product="recombinase activating protein 2"
FT                   /db_xref="GOA:C5I0F1"
FT                   /db_xref="InterPro:IPR004321"
FT                   /db_xref="InterPro:IPR011043"
FT                   /db_xref="InterPro:IPR015915"
FT                   /db_xref="UniProtKB/TrEMBL:C5I0F1"
FT                   /protein_id="ACR50529.1"
FT                   /translation="DSCYLPPLRCPAVCRLDPYDGLPESYLIHGGRTPNNEISSSLYLL
FT                   TMDSRGCNRKLTVRCQEKELVAEVPGARYGHTMSMVQSRGKTACVLFGGRSYMPAGERT
FT                   TESWNSVIDCTSQVFLFDLEFGCSSAHTLPELHDGQSFHVALSREDCVYFIGGHSLTSD
FT                   SRPPRLFRLRVELLQGSPLLTCETLDTGLSISSAIVTRTGPSHKYIILGGYQSDSQKRL
FT                   ECSTVILDEKGIQFEPLEPPNWTPDIIHSRTWFGGSNGEGSILLG"
XX
SQ   Sequence 802 BP; 172 A; 223 C; 211 G; 195 T; 1 other;
     tgactcctgc tacctccctc cgttgcgttg tccagctgtc tgccgcctcg acccctacga        60
     cggccttcca gagagttatc tcatccacgg tggccgcact ccaaacaatg agatctcatc       120
     aagcctgtac ctgctgacca tggacagtcg cggctgcaat cgtaaattaa cggtgcgctg       180
     ccaagagaaa gaactggtgg ccgaagtgcc gggggcccga tatggccaca caatgagcat       240
     ggtgcagagc cgcgggaaga ctgcctgtgt gctgtttggg ggtcgatcct acatgcctgc       300
     aggagagcga accacagaga gctggaacag tgttattgac tgyacttctc aggtgtttct       360
     gttcgacctg gagtttggtt gctcctctgc acacactctg cccgagctcc atgatggaca       420
     atccttccat gtggcccttt ccagagaaga ctgtgtttac tttatagggg gtcactcgct       480
     cacttctgac tcacgtccac ctcgactgtt tcgcctgcgc gttgagcttt tgcagggcag       540
     ccctttgctt acctgtgaga cactggacac tggcttatcc atctctagcg ccattgtcac       600
     tcgtacaggt ccctctcaca aatatatcat cttaggtgga tatcagtcag actctcagaa       660
     gaggctggag tgcagcactg tgattctgga tgagaaaggg atccagtttg agcccttaga       720
     accaccaaac tggacaccag acatcatcca cagtcgtact tggtttgggg gcagcaatgg       780
     ggagggaagc atcctgctag gt                                                802
//