ID   FJ616690; SV 1; linear; genomic DNA; STD; VRT; 901 BP.
XX
AC   FJ616690;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Pomacentrus albicaudatus recombinase activating protein 1 (rag-1) gene,
DE   partial cds.
XX
KW   .
XX
OS   Pomacentrus albicaudatus (whitefin damsel)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Pomacentridae; Pomacentrus.
XX
RN   [1]
RP   1-901
RX   DOI; 10.1016/j.ympev.2008.12.010.
RX   PUBMED; 19135160.
RA   James Cooper W., Smith L.L., Westneat M.W.;
RT   "Exploring the radiation of a diverse reef fish family: phylogenetics of
RT   the damselfishes (Pomacentridae), with new classifications based on
RT   molecular analyses of all genera";
RL   Mol. Phylogenet. Evol. 52(1):1-16(2009).
XX
RN   [2]
RP   1-901
RA   Cooper W.J., Smith L.L., Westneat M.W.;
RT   ;
RL   Submitted (08-JAN-2009) to the INSDC.
RL   Department of Zoology, Field Museum of Natural History, 1400 South Lake
RL   Shore Drive, Chicago, IL 60605, USA
XX
DR   MD5; cae7efd2a2214bcf5900b5f247b01e84.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..901
FT                   /organism="Pomacentrus albicaudatus"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="FMNH Bus03-20 T-378"
FT                   /db_xref="taxon:646027"
FT   gene            <1..>901
FT                   /gene="rag-1"
FT   mRNA            <1..>901
FT                   /gene="rag-1"
FT                   /product="recombinase activating protein 1"
FT   CDS             <1..>901
FT                   /codon_start=2
FT                   /gene="rag-1"
FT                   /product="recombinase activating protein 1"
FT                   /db_xref="GOA:C5I039"
FT                   /db_xref="InterPro:IPR024627"
FT                   /db_xref="UniProtKB/TrEMBL:C5I039"
FT                   /protein_id="ACR50417.1"
FT                   /translation="LHSLRTAEKELLPGFHQFEWQPALKNVSPSCNVAIINGLSGWASS
FT                   VDDSPADTITRRFRYDVALVSALKDLEEDIMDGLRESGMEDSACTSGFSVMIKECCDGM
FT                   GDVSEKHGGGPVVPEKAVRFSFTIMSVSILADGKKEEVTIFTEPKPNSEMSCKPLCLMF
FT                   VDESDHETLTALLGPIVAERNAMKESRLILSIGGLSRSFRFHFRGTGYDEKMVREMEGL
FT                   EASGSTYVCTLCDSTRAEAAKNMVLHSVTRGHDENLERYEIWRTNPFSESAEELRDRVK
FT                   GVSSKPFLETHPTLDALHC"
XX
SQ   Sequence 901 BP; 204 A; 235 C; 254 G; 208 T; 0 other;
     gctgcacagc ctccgaactg cagagaagga gcttcttccc ggctttcacc agtttgaatg        60
     gcagccagct ctcaagaatg tgtctccatc ttgcaacgtt gccattatta acgggctctc       120
     tggatgggct tcctcggtgg atgactcccc ggctgacaca atcactcggc gctttcgtta       180
     tgatgtggca ctggtgtctg cgttaaagga tctggaggag gacatcatgg acgggctgag       240
     agagagtggg atggaagaca gcgcttgcac ctcaggcttt agcgttatga tcaaggaatg       300
     ttgtgatggc atgggtgatg tcagcgagaa gcacggcgga ggacctgttg ttcccgagaa       360
     ggcggtgcgc ttctctttca ccattatgtc tgtctccatc ctcgcagacg gcaagaagga       420
     ggaggttacc attttcactg agccaaaacc aaactcagag atgtcctgca agcccctctg       480
     cctgatgttt gtggatgagt cagaccatga gacactcaca gctctcctgg ggcccatagt       540
     tgcagagcgg aatgcaatga aagagagcag actcatcctg tccatcggcg gcctgtctcg       600
     ctcttttcgc ttccacttca ggggcacggg atacgatgag aagatggtgc gtgagatgga       660
     gggtctggag gcctcggggt ccacatatgt ctgcactctg tgtgactcca cccgtgcaga       720
     agccgctaaa aacatggtgc ttcactcagt cactcgtggt catgacgaga acctagaacg       780
     atacgaaatc tggaggacca accccttctc tgagtctgca gaagagctgc gagacagagt       840
     caaaggggtc tcctctaagc ccttcttgga gacccatccc acgctcgatg cattgcactg       900
     c                                                                       901
//