ID   FJ616654; SV 1; linear; genomic DNA; STD; VRT; 901 BP.
XX
AC   FJ616654;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Chromis xanthochira recombinase activating protein 1 (rag-1) gene, partial
DE   cds.
XX
KW   .
XX
OS   Chromis xanthochira (yellow-axil chromis)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Pomacentridae; Chromis.
XX
RN   [1]
RP   1-901
RX   DOI; 10.1016/j.ympev.2008.12.010.
RX   PUBMED; 19135160.
RA   James Cooper W., Smith L.L., Westneat M.W.;
RT   "Exploring the radiation of a diverse reef fish family: phylogenetics of
RT   the damselfishes (Pomacentridae), with new classifications based on
RT   molecular analyses of all genera";
RL   Mol. Phylogenet. Evol. 52(1):1-16(2009).
XX
RN   [2]
RP   1-901
RA   Cooper W.J., Smith L.L., Westneat M.W.;
RT   ;
RL   Submitted (08-JAN-2009) to the INSDC.
RL   Department of Zoology, Field Museum of Natural History, 1400 South Lake
RL   Shore Drive, Chicago, IL 60605, USA
XX
DR   MD5; 6bec12a3bd7da159d7d6bb8f8da13622.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..901
FT                   /organism="Chromis xanthochira"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="FMNH Bus03-43 T-577"
FT                   /db_xref="taxon:231458"
FT   gene            <1..>901
FT                   /gene="rag-1"
FT   mRNA            <1..>901
FT                   /gene="rag-1"
FT                   /product="recombinase activating protein 1"
FT   CDS             <1..>901
FT                   /codon_start=2
FT                   /gene="rag-1"
FT                   /product="recombinase activating protein 1"
FT                   /db_xref="GOA:C5I003"
FT                   /db_xref="InterPro:IPR024627"
FT                   /db_xref="UniProtKB/TrEMBL:C5I003"
FT                   /protein_id="ACR50381.1"
FT                   /translation="LHSLRTAEKELLPGFHQFEWQPALKNVSTSCNVGIINGLSGWASS
FT                   VDESPADTITRRFRYDVALVSALKDLEEDIMDGLRESGMEDSACTSGFSVMIKECCDGM
FT                   GDVSEKHGGGPVVPEKAVRFSFTVMSVSVLADNKKEEVTIFTEPKPNSELSCKPLSLMF
FT                   VDESDHETLTAVLGPIVAERNAMKESRLILSIGGLPRSIRFHFRGTGYDEKMVREMEGL
FT                   EASGSTYVCTLCDSTRAEASKNMVLHSVTRSHEENLERYEIWRSNPFSESADELRDRVK
FT                   GVSSKPFLETQPTLDALHC"
XX
SQ   Sequence 901 BP; 206 A; 226 C; 252 G; 213 T; 4 other;
     gctgcacagc ctccgaactg cagagaagga gcttctccct ggctttcacc agtttgaatg        60
     gcagccagct ctcaagaatg tgtctacatc ttgcaacgtt ggcattatta acggrctctc       120
     tggatgggct tcctcggtgg atgagtcccc ggctgacaca atcactcggc gctttcgtta       180
     tgatgtggca ttggtgtctg cattaaagga tctggaggag gacatcatgg acgggctgag       240
     agagagtggg atggaagaca gcgcttgcac ctcaggcttt agcgtcatga tcaaggaatg       300
     ctgtgatggt atgggtgatg tcagcgagaa gcacggtgga ggacctgttg ttcctgagaa       360
     ggctgtacgc ttctctttca ctgttatgtc tgtctccgtc ctcgcagaca ataagaagga       420
     ggaggttacc attttcactg agccgaaacc aaactcagag ctgtcctgta agcccctctc       480
     cctgatgttc gtggatgagt cagaccatga gacactcaca gctgtcctgg ggcccatagt       540
     tgcagagcgg aatgcaatga aagagagccg actcatccta tccatcggtg gcctgcctcg       600
     ytccattcgc ttccacttca ggggcacagg gtatgatgag aagatggtgc gtgagatgga       660
     gggcttggag gcctccgggt ccacgtatgt ctgcactctg tgtgactcta ctcgtgcaga       720
     agcctctaaa aacatggtcc ttcactcmgt cactcgcagt cacgaggaga acctggaacg       780
     atacgaaata tggagaagca accccttctc tgagtctgca gatgagctga gagacagagt       840
     caaaggggtc tcctccaagc ccttcttgga gacccagccy acgctagatg ctttgcactg       900
     c                                                                       901
//