ID   FJ528489; SV 1; linear; genomic DNA; STD; INV; 533 BP.
XX
AC   FJ528489;
XX
DT   18-JAN-2009 (Rel. 99, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Alpheus cf. armillatus D specimen 7 cytochrome oxidase subunit 1 gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Alpheus cf. armillatus D
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Alpheoidea; Alpheidae; Alpheus.
OG   Mitochondrion
XX
RN   [1]
RP   1-533
RX   DOI; 10.1016/j.ympev.2008.10.026.
RX   PUBMED; 19041948.
RA   Mathews L.M., Anker A.;
RT   "Molecular phylogeny reveals extensive ancient and ongoing radiations in a
RT   snapping shrimp species complex (Crustacea, Alpheidae, Alpheus
RT   armillatus)";
RL   Mol. Phylogenet. Evol. 50(2):268-281(2009).
XX
RN   [2]
RP   1-533
RA   Mathews L.M., Anker A.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   Biology, Worcester Polytechnic Institute, 100 Institute Road, Worcester, MA
RL   01609, USA
XX
DR   MD5; 305952adb4f43dce8b6c04ea8a19f816.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..533
FT                   /organism="Alpheus cf. armillatus D"
FT                   /organelle="mitochondrion"
FT                   /isolate="specimen 7"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:588307"
FT   CDS             <1..>533
FT                   /codon_start=3
FT                   /transl_table=5
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:B8YFG5"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B8YFG5"
FT                   /protein_id="ACL67959.1"
FT                   /translation="HPEVYILILPAFGMISHIINQESGKKEAFGTLGMIYAMAAIGILG
FT                   FVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLGTLHGSQFTYSPSLLWALG
FT                   FVFLFTMGGLTGVVLANSSIDIILHDTYYVVAHFHYVLSMGAVFGIFAGISHWFPLFTG
FT                   LSLNPQWLKMHFFT"
XX
SQ   Sequence 533 BP; 153 A; 127 C; 88 G; 165 T; 0 other;
     tccacccaga agtttacatt ttaattcttc ctgctttcgg aataatctcc catatcatta        60
     atcaagaatc agggaaaaaa gaagcatttg gaacactagg catgatctac gcaatagcag       120
     caatcggaat tttaggattt gtagtatgag cccaccatat attcacagta ggtatggatg       180
     tagacacacg agcttacttc acatcagcaa ccataatcat tgctgttccc actggaatta       240
     aaattttcag ttgattagga acattacacg gtagacaatt cacctactca ccatcactac       300
     tttgggcgct tggatttgtg tttctgttta caataggcgg actaacagga gtagtcttag       360
     ctaactcctc tatcgacatt attctccacg acacctatta tgtagtagcc cactttcact       420
     acgtactatc cataggggca gttttcggaa tcttcgccgg aatctctcat tgattccctc       480
     tttttacagg actctcttta aatccccagt gactcaagat acacttcttc act              533
//