ID   FJ528486; SV 1; linear; genomic DNA; STD; INV; 533 BP.
XX
AC   FJ528486;
XX
DT   18-JAN-2009 (Rel. 99, Created)
DT   18-JAN-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Alpheus cf. armillatus C specimen 4 cytochrome oxidase subunit 1 gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Alpheus cf. armillatus C
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Alpheoidea; Alpheidae; Alpheus.
OG   Mitochondrion
XX
RN   [1]
RP   1-533
RX   DOI; 10.1016/j.ympev.2008.10.026.
RX   PUBMED; 19041948.
RA   Mathews L.M., Anker A.;
RT   "Molecular phylogeny reveals extensive ancient and ongoing radiations in a
RT   snapping shrimp species complex (Crustacea, Alpheidae, Alpheus
RT   armillatus)";
RL   Mol. Phylogenet. Evol. 50(2):268-281(2009).
XX
RN   [2]
RP   1-533
RA   Mathews L.M., Anker A.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   Biology, Worcester Polytechnic Institute, 100 Institute Road, Worcester, MA
RL   01609, USA
XX
DR   MD5; 07da984f1e93b144ce818e1ab0f2f616.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..533
FT                   /organism="Alpheus cf. armillatus C"
FT                   /organelle="mitochondrion"
FT                   /isolate="specimen 4"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:588306"
FT   CDS             <1..>533
FT                   /codon_start=3
FT                   /transl_table=5
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:B8YFG1"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B8YFG1"
FT                   /protein_id="ACL67956.1"
FT                   /translation="HPEVYILILPAFGMISHIINQESGKKEAFGTLGMIYAMAAIGILG
FT                   FVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLGTLHGSQFTYSPSLLWALG
FT                   FVFLFTMGGLTGVVLANSSIDIILHDTYYVVAHFHYVLSMGAVFGIFAGISHWFPLFTG
FT                   LSLNPQWLKMHFFT"
XX
SQ   Sequence 533 BP; 147 A; 122 C; 93 G; 171 T; 0 other;
     ttcacccgga agtctacatt ttaattttac ctgctttcgg aataatttcc catattatta        60
     accaagagtc ggggaaaaag gaagcatttg gaacactagg tataatttat gcaatagcgg       120
     caattggaat cctcggattt gtagtctgag cacaccatat attcacagtg ggtatagacg       180
     ttgacacacg agcctacttt acatcagcaa ctataattat tgccgtcccc actggaatta       240
     aaattttcag ttgactagga actttacatg gtagacaatt cacctatagg ccctctcttc       300
     tatgagccct cggatttgta ttcttattca cgataggtgg attaacagga gtagttctag       360
     ccaactcttc aattgacatc attctccatg atacttacta tgtggtggct cacttccatt       420
     acgttctatc tataggagca gtatttggaa tcttcgctgg gatttcccat tgattcccac       480
     tcttcacagg gctttcttta aacccccagt gactcaaaat acacttcttc acc              533
//