ID   EU524511; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   EU524511;
XX
DT   03-MAY-2008 (Rel. 95, Created)
DT   06-MAR-2012 (Rel. 112, Last updated, Version 6)
XX
DE   Cottus cognatus voucher ROM:ICH:BCF-0456-5 cytochrome oxidase subunit I
DE   (COI) gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus cognatus (slimy sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-652
RX   PUBMED; 22423312.
RA   Hubert N., Hanner R., Holm E., Mandrak N.E., Taylor E., Burridge M.,
RA   Watkinson D., Dumont P., Curry A., Bentzen P., Zhang J., April J.,
RA   Bernatchez L.;
RT   "Identifying Canadian Freshwater Fishes through DNA Barcodes";
RL   PLoS One 3(6):e2490-e2490(2008).
XX
RN   [2]
RP   1-652
RA   Hubert N., Zhang J., April J., Bernatchez L., Hanner R., Holm E.,
RA   Mandrak N.E., Taylor E., Burridge M., Watkinson D., Curry A., Bentzen P.;
RT   ;
RL   Submitted (25-FEB-2008) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 579 Gordon Street,
RL   Guelph, Ontario N1G 2W1, Canada
XX
DR   MD5; dfb6f22a0778902f1505ec09160d7027.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus cognatus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Canada"
FT                   /lat_lon="44.03 N 78.65 W"
FT                   /specimen_voucher="ROM:ICH:BCF-0456-5"
FT                   /PCR_primers="fwd_name: C_VF1LFt1, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaaagacattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaargayatygg, fwd_seq:
FT                   tgtaaaacgacggccagtattcaaccaatcataaagatattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaacca<i>aa<i>ga<i>at<i>gg,
FT                   rev_name: C_VR1LRt1, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccraaraayca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccaaagaatca, rev_seq:
FT                   caggaaacagctatgactaaacttctggatgtccaaaaaatca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtg<i>cc<i>aa<i>aa<i>ca"
FT                   /PCR_primers="fwd_name: C_FishF1t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_name:
FT                   C_FishR1t1, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:147210"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:B2LI80"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B2LI80"
FT                   /protein_id="ACC92553.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 150 A; 192 C; 116 G; 194 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagctttaa gccttctaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataatgtaat       120
     tgttacagcc catgctttcg taataatttt ctttatagta ataccaatta taatcggagg       180
     tttcgggaac tgactcgttc ccctgatgat tggcgctcct gatatggcct ttcctcgaat       240
     gaataatatg agcttttgac ttcttccccc atctttttta ctcctccttg cctcttcggg       300
     agtcgaagca ggggccggaa ccggatgaac agtctacccg cccctcgccg gaaacctcgc       360
     ccacgcagga gcctctgttg atttaacaat cttctccctt cacctagcag gtatctcctc       420
     tattcttgga gcaatcaact ttatcacaac tatcattaac ataaaacccc ctgctatttc       480
     acaataccag accccactct ttgtatgatc tgttcttatt actgccgttc tactgcttct       540
     ttccctcccc gttcttgccg ccggcatcac aatactcctg acagaccgaa atcttaacac       600
     caccttcttt gaccctgccg gaggggggga cccaatcctt taccaacatc tc               652
//