ID   EU523994; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   EU523994;
XX
DT   03-MAY-2008 (Rel. 95, Created)
DT   06-MAR-2012 (Rel. 112, Last updated, Version 6)
XX
DE   Cottus asper voucher BIOUG<CAN>:BCF-676-2 cytochrome oxidase subunit I
DE   (COI) gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Cottus asper (prickly sculpin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-652
RX   PUBMED; 22423312.
RA   Hubert N., Hanner R., Holm E., Mandrak N.E., Taylor E., Burridge M.,
RA   Watkinson D., Dumont P., Curry A., Bentzen P., Zhang J., April J.,
RA   Bernatchez L.;
RT   "Identifying Canadian Freshwater Fishes through DNA Barcodes";
RL   PLoS One 3(6):e2490-e2490(2008).
XX
RN   [2]
RP   1-652
RA   Hubert N., Zhang J., April J., Bernatchez L., Hanner R., Holm E.,
RA   Mandrak N.E., Taylor E., Burridge M., Watkinson D., Curry A., Bentzen P.;
RT   ;
RL   Submitted (25-FEB-2008) to the INSDC.
RL   Biodiversity Institute of Ontario, University of Guelph, 579 Gordon Street,
RL   Guelph, Ontario N1G 2W1, Canada
XX
DR   MD5; 3e936f3b1b8610e97ece94ada4c85e3d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Cottus asper"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Canada"
FT                   /specimen_voucher="BIOUG<CAN>:BCF-676-2"
FT                   /PCR_primers="fwd_name: C_VF1LFt1, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaaagacattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaaccacaargayatygg, fwd_seq:
FT                   tgtaaaacgacggccagtattcaaccaatcataaagatattgg, fwd_seq:
FT                   tgtaaaacgacggccagttctcaaccaacca<i>aa<i>ga<i>at<i>gg,
FT                   rev_name: C_VR1LRt1, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccraaraayca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtggccaaagaatca, rev_seq:
FT                   caggaaacagctatgactaaacttctggatgtccaaaaaatca, rev_seq:
FT                   caggaaacagctatgactagacttctgggtg<i>cc<i>aa<i>aa<i>ca"
FT                   /PCR_primers="fwd_name: C_FishF1t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, fwd_seq:
FT                   tgtaaaacgacggccagtcgactaatcataaagatatcggcac, rev_name:
FT                   C_FishR1t1, rev_seq:
FT                   caggaaacagctatgacacttcagggtgaccgaagaatcagaa, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:214916"
FT                   /bio_material="UOG:BIO:BCF-676-2"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:B2LI75"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:B2LI75"
FT                   /protein_id="ACC92036.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 151 A; 197 C; 117 G; 187 T; 0 other;
     cctatatcta gtatttggtg cttgagccgg aatagtaggc acagccttaa gcctcctaat        60
     tcgagcagaa ctaagccaac ccggcgccct tttgggggac gaccagattt ataatgtaat       120
     tgttacggcc catgctttcg taataatttt ctttatagta ataccaatta taatcggggg       180
     tttcgggaac tgactcatcc ccctaatgat cggcgcccct gatatggcct ttcctcgaat       240
     aaacaatatg agcttttgac ttcttccccc atctttttta ctcctcctag cctcttcggg       300
     ggtcgaagca ggagcgggaa ccggatgaac agtttaccca cccctcgccg ggaacctcgc       360
     ccatgcagga gcctctgttg acctaacgat cttctccctt cacctagcag gtatctcttc       420
     tattcttgga gcaatcaact ttatcacaac tatcattaat atgaaacccc ctgctatttc       480
     tcaataccag acccctctat tcgtatggtc tgttcttatt actgctgtcc tactgcttct       540
     ttccctcccc gtacttgccg ccggcatcac aatgctccta acagaccgaa accttaacac       600
     caccttcttt gaccctgccg gaggaggaga cccaatcctt taccaacacc tc               652
//