ID EF605268; SV 1; circular; genomic DNA; STD; PRO; 5031 BP. XX AC EF605268; XX DT 27-FEB-2008 (Rel. 94, Created) DT 10-APR-2020 (Rel. 144, Last updated, Version 2) XX DE Lactobacillus sakei strain Rits9 plasmid pLS55, complete sequence. XX KW . XX OS Lactobacillus sakei OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; OC Lactobacillus. OG Plasmid pLS55 XX RN [1] RP 1-5031 RX DOI; 10.1128/AEM.01463-07. RX PUBMED; 18192429. RA Ammor M.S., Gueimonde M., Danielsen M., Zagorec M., van Hoek A.H., RA de Los Reyes-Gavilan C.G., Mayo B., Margolles A.; RT "Two different tetracycline resistance mechanisms, plasmid-carried tet(L) RT and chromosomally located transposon-associated tet(M), coexist in RT Lactobacillus sakei Rits 9"; RL Appl. Environ. Microbiol. 74(5):1394-1401(2008). XX RN [2] RP 1-5031 RA Ammor M.S., Gueimonde M., Danielsen M., Zagorec M., RA de los Reyes-Gavilan C.G., Mayo B., Margolles A.; RT ; RL Submitted (11-MAY-2007) to the INSDC. RL Microbiology and Biochemistry of Dairy Products, IPLA - CSIC, Ctra. RL Infiesto s/n, Villaviciosa, Asturias 33300, Spain XX DR MD5; 6fe86525da6de6ef4f38952f88806320. DR BioSample; SAMN14225696. DR EuropePMC; PMC2258611; 18192429. DR EuropePMC; PMC3019722; 21057017. DR RFAM; RF01691; Bacillus-plasmid. XX FH Key Location/Qualifiers FH FT source 1..5031 FT /organism="Lactobacillus sakei" FT /plasmid="pLS55" FT /strain="Rits9" FT /mol_type="genomic DNA" FT /db_xref="taxon:1599" FT gene 216..1598 FT /gene="tetL" FT CDS 216..1598 FT /codon_start=1 FT /transl_table=11 FT /gene="tetL" FT /product="TetL" FT /note="tetracycline efflux pump" FT /db_xref="GOA:B0YMX0" FT /db_xref="InterPro:IPR001411" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR020846" FT /db_xref="InterPro:IPR036259" FT /db_xref="UniProtKB/TrEMBL:B0YMX0" FT /protein_id="ABV57473.1" FT /translation="MNTSYSQSNLRHNQILIWLCVLSFFSVLNEMVLNVSLPDIANDFN FT KSPASTNWVNTAFMLTFSIGTALYGKLSDQLGIKRLLLFGIIINCFGSVIAFVGHSFFP FT ILILARFIQGAGAAAFPALVMVVVARYIPKENRGKAFGLIGSIVAMGEGIGPAIGGMIA FT HFIHWSYLLLIPMMTIITVPFLIKLLKKEVRIKGHFDIVGIILMSVGIVFFMLFTTSYN FT ISFLIISILSFLIFVKHIRKVTEPFVEPALGKNISFIIGVLCGGLIFGTVAGFISMVPY FT MMKDVYQLSTAAIGSVIIFPGAMSVIIFGYIGGLLVDRKGPLYVLTIGVTFLSVSFLIA FT AFFLEVTPWLLTIILVFVFGGLSFTKTVISTIVSSSLKQKEAGAGMSLLNFTSFLSEGM FT GIAIVGGLLSVRLLNQKLLPMDLDQSTYLYSNMLFLFTGVVVTSWLITLNVYKRRQIQF FT KS" FT gene 2114..3433 FT /gene="mob" FT CDS 2114..3433 FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /product="Mob" FT /db_xref="GOA:B0YMX1" FT /db_xref="InterPro:IPR001668" FT /db_xref="UniProtKB/TrEMBL:B0YMX1" FT /protein_id="ABV57474.1" FT /translation="MEVYEMAHVQKFTKGNMQGLSIHLDRKTENHSNKNIDTERTHLNY FT DLCEKDGDTLSRMDERLSEVYCMNRKDVKVCCEWIVTLPESLHNESVEYQRKFFEETYE FT FLTDRYGGQENVVSANVHNDETTPHMHFDFVPVVWDEKKEREKVSAKEVLTRSELKSFH FT TDLDRHLKERIPEIYQEGILNDKTIGIENIHSLKKYSAEIEQQKEEMANEFKSFKYPQK FT VLKSIEREVEKKTVGVFNKKEVVMLPAERYEKMKELSNSSIRIQQRFDKYKSKAVEEIK FT NLKVNVKNFEEDNEHLRYRNIDFGREITLLQKERDRQTENAIVYKSILEEKEPDLQIST FT LEFQGRLVLHNLENDRMPKNKEEGENWLEILEENKEEKTIPQNRLEKAIGKIKLFLEKF FT IKRAKEADFSMDWLVEKNKELSQQRQQQKKTKSRSSGMEL" FT gene 4144..4800 FT /gene="repB" FT CDS 4144..4800 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="RepB" FT /db_xref="GOA:B0YMX2" FT /db_xref="InterPro:IPR002631" FT /db_xref="InterPro:IPR041919" FT /db_xref="UniProtKB/TrEMBL:B0YMX2" FT /protein_id="ABV57475.1" FT /translation="MAKDKARYFTFLLYPESIPEDWEMKLESIGLPIAISPLHDKDLSD FT VEGQKYKKAHYHVIYVAKNPVTTDSVRKKVRQILGDKSVSMVQIVVQSMENIYLYLTHE FT SKDAIAKKKRVYDKKDIKLLNNFDIDRYITLDAEDKDDMLNDVCDLIDENGLANIRELR FT RFVKTRGAEHNLPSMKIINSVLRSHTGLIRLYFDAVYQERKYGRSDFDKETGELK" XX SQ Sequence 5031 BP; 1633 A; 749 C; 1099 G; 1550 T; 0 other; ttgagataca aaagatgttc aacaaacggg ccatttaacg gaataagtga tgaaaactga 60 atttaaaact tagtctgtat gtggtaaaat gtttcaatca agattaggag gcattaatta 120 tgaagtgcaa tgaatgtaac agggttcaat taaaagaggg aaacgtatca ttagccctat 180 aaactgcgtc taccctcatt attggaggtc gaaatatgaa tacgtcttat tcacaatcaa 240 atttacgaca caaccaaatt ttaatttggc tttgcgttct atcttttttt agcgtattaa 300 atgaaatggt tttgaacgtc tcattacctg atattgcaaa tgattttaat aaatcaccgg 360 cgagtacaaa ctgggtgaac acagccttta tgttaacctt ttctattgga acagctctat 420 atggaaagct atctgatcag ctaggcatta aaaggttact cctatttggg attataataa 480 attgcttcgg atcggtaatt gcgtttgttg gacattcttt ttttcccata cttattctgg 540 ctcgatttat tcaaggagct ggtgcagctg catttccagc actcgtgatg gttgtagttg 600 cgcgctatat tccaaaggaa aataggggta aagcgtttgg tcttattggc tccatagtag 660 ctatgggaga aggtatcggt ccagctattg gtggaatgat agctcatttt atccattggt 720 cttatcttct gctcattcca atgatgacaa ttatcactgt tccgttcctt attaaattgt 780 tgaaaaaaga agtaaggata aaaggtcatt ttgatattgt aggaattata ctaatgtcag 840 tgggcattgt attttttatg ctgtttacaa catcttataa catttctttt ctgatcatca 900 gtattctgtc attcctgata tttgtaaaac atattaggaa agtaacagaa ccttttgttg 960 aacctgcact ggggaaaaat atttctttta taattggtgt cctttgtgga ggacttatat 1020 ttggtacagt agcagggttt atctctatgg ttccttacat gatgaaagat gtatatcaac 1080 taagtactgc tgcaattggc agtgtgatta ttttccctgg agcaatgagc gttattatct 1140 tcggttacat tggtggatta cttgttgata gaaaaggtcc attgtacgtg ttaaccattg 1200 gagttacatt tctttccgtt agctttttaa ttgctgcctt ttttttagaa gtaacaccat 1260 ggttactgac aattatatta gtttttgttt ttggtgggct gtcattcacc aaaacagtta 1320 tatctacaat tgtttcaagt agtttgaaac aaaaggaagc tggtgccgga atgagtttgc 1380 ttaattttac cagtttttta tcagagggaa tgggtattgc aattgttggt ggtttattat 1440 ctgtacgctt actgaatcag aagttgctac ctatggacct tgatcaatcc acttatttgt 1500 atagtaatat gctattcctt tttacaggag tcgttgttac tagttggctg atcaccttga 1560 atgtatataa acgaagacaa attcaattta aaagttgaat accagagata aattaaatga 1620 cttctagctt tcttaagcaa tcgggcgcga ttgttgaaga tcagaaaatt tttaagaggt 1680 ggcaaatttg ccacctcttt ttattttctt cggctaaaag tgaaactttc tgcagaagaa 1740 aatacgtggc aattgtcaac ggtaaatgtc tgactgaagc gacagcgaaa ggaatttaag 1800 gagttgacaa ttttgctaca cccgaaccct cttggctcgt caaaaggcaa caccttttga 1860 cctgccaacc ggcgagggag ccccctcaaa aagtgagggg gttgggggag ctttttggag 1920 ggggtcgagg ggaaactttt ccctcgtggg tttgggcaaa gcccatgatc ttttcttttg 1980 cttttgaatt tgggggagcg gtttttgctc ccttgctttt cgcctcgcag agcacgtcca 2040 gaagaattct ggtataccgt gttataccaa atggttttgg ctcctctcgc ctgatgtgtt 2100 attctcttct caaatggagg tgtacgagat ggcgcacgtt cagaaattca ctaaaggaaa 2160 tatgcaaggc ttgtcaattc acttagaccg aaaaacagaa aaccattcca acaaaaatat 2220 tgatacagag cgtacacatc tgaactatga tttatgcgaa aaagacggag atacactttc 2280 ccgcatggac gaaagattga gtgaagttta ttgcatgaat cggaaagatg taaaggtgtg 2340 ctgtgagtgg atcgtcacac tgcctgaatc gcttcacaat gaatctgttg agtatcagag 2400 gaaattcttt gaggaaacat acgaatttct tacagatcgt tatggaggac aggagaacgt 2460 cgtttcagcg aatgtccaca atgatgaaac aacccctcac atgcattttg attttgttcc 2520 ggttgtttgg gatgagaaaa aagagcgtga aaaagtatca gcgaaagaag tgctgacgag 2580 atcggaattg aaaagttttc acactgattt agatagacac ttgaaagagc gaatccctga 2640 aatttatcaa gaaggaattt taaatgataa gacgatcggg attgaaaata ttcattcgct 2700 gaaaaaatat tcagcggaga ttgaacagca gaaagaggaa atggctaacg aatttaagag 2760 ttttaaatat ccgcaaaaag ttttgaaaag tattgagcga gaagttgaga agaaaactgt 2820 tggagtcttt aataaaaaag aagtagttat gttgccagcg gaacgctacg agaaaatgaa 2880 agagttatcg aattcgagta ttagaattca acaacgattt gataaataca aatcaaaagc 2940 tgttgaagaa attaaaaatt taaaagtaaa tgtgaaaaat ttcgaggaag ataacgaaca 3000 tcttcgctat cgaaatattg attttggtag agaaattaca ttgttgcaaa aagagcgaga 3060 tcgacaaaca gaaaatgcaa ttgtttataa aagtattttg gaagaaaaag agcccgatct 3120 tcagattagt acgttagaat ttcaaggccg gttagtgctt cataatttag agaatgaccg 3180 tatgccaaag aataaagaag agggagaaaa ctggctggag atcctcgaag aaaataaaga 3240 agaaaagacg attccacaaa atcgacttga aaaagcgatt ggtaaaatta aattgttttt 3300 agagaaattt ataaaacggg ctaaagaagc agatttctcg atggattggc tggtggagaa 3360 aaacaaagaa ctttctcagc agcggcagca acagaagaaa acgaaaagca gatctagtgg 3420 catggagttg taattgatct tagaatgccc ttatttctct tcaaaatcgt ttttaagagc 3480 ttttgaagta gtttgctagg gtttgtgtgg ttttttaagc aatgcggctt aaaaaggctt 3540 gtgagcgttt ttaaagtaat tagaaatatg gttttagatt tttagaaaag ccctgtgttt 3600 tttaagggct ttttttgctt tttatgaact ggatttcgaa ctagatttta cgaggagaga 3660 gggaaaaagg gggggctact acgacccccc ctttaagtgc cgagtgccaa tttcagcgaa 3720 aaagccgcac gaagccaggt gggacaaggg tttgtggtgg gcgagttctc ggcgactttt 3780 cagcgacttt tcagcgactt ttcagctgaa tttcggaaat ttgtatttcc ctgtaatgct 3840 ttactccatc cgaataatgt tatatactaa taaaaaaaca tgagaaagaa ggttttgtta 3900 tggctcaaaa aaatgaaaaa gaagaaatgc aaagtgtaac gatccgtatt cccaaagagt 3960 tgtattttga atataagcaa gctttgttgg agcaagggaa aattgtgact tatgatgtgc 4020 ggagatatat gaatgatgtt gtagaaaatc ataagaaggg gcatcaatga gcataaaaaa 4080 agagcgcctc tgcgaaaggt acgctcaatt tacaactcat ttttgtaagg tgaatatatc 4140 attatggcta aagataaagc aagatacttc acgtttttat tataccccga atctatccct 4200 gaagattggg aaatgaaatt agaatcaatt ggtttgccga ttgcaattag tccacttcat 4260 gataaagatt taagtgatgt tgaagggcaa aaatataaaa aggctcacta tcatgtaatt 4320 tatgtagcaa aaaatccagt aaccactgat agtgtgcgta aaaaagtaag acaaattttg 4380 ggcgataaga gtgtttctat ggttcaaatt gtagttcaaa gcatggagaa tatatatctg 4440 tatttaactc atgaatcaaa agatgctatt gctaaaaaga aacgtgtgta tgacaagaaa 4500 gacattaagc tgctgaacaa ctttgatatt gatcggtaca taacgcttga tgccgaagac 4560 aaagacgaca tgttgaatga tgtctgtgat ttgattgatg aaaatggact agcaaacatt 4620 cgtgagttaa ggagatttgt taaaactcgt ggggctgaac ataatttgcc tagcatgaag 4680 ataataaact ctgttttgcg gtcgcatact ggattgatta gattgtattt cgatgctgtt 4740 tatcaagaac ggaaatatgg tcgaagcgat ttcgacaaag aaacaggcga attaaaatga 4800 caaaaaggag gtagattgaa tgattactag agaagatgag gcgaattttc ctgattttaa 4860 aacagtgttg gaagcaaaac aatattttag aaaacgttat ggcaaaagct atcgtgaagg 4920 tggccgtgag caattagacg aaaatcatat ttgctatttt gacgaagttg attatcaacc 4980 tgttcaaatt tctgtttttg atgatggatc ggttttagtt catgtggttt a 5031 //