ID   EF104700; SV 1; linear; genomic DNA; STD; INV; 1404 BP.
XX
AC   EF104700;
XX
DT   07-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Liriomyza brassicae cytochrome oxidase subunit I (COI) gene, partial cds;
DE   mitochondrial.
XX
KW   .
XX
OS   Liriomyza brassicae (cabbage leafminer)
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Opomyzoidea;
OC   Agromyzidae; Phytomyzinae; Liriomyza.
OG   Mitochondrion
XX
RN   [1]
RP   1-1404
RX   DOI; 10.1016/j.ympev.2006.12.018.
RX   PUBMED; 17291785.
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M.;
RT   "Phylogenetic relationships within the leaf-mining flies (Diptera:
RT   Agromyzidae) inferred from sequence data from multiple genes";
RL   Mol. Phylogenet. Evol. 42(3):756-775(2007).
XX
RN   [2]
RP   1-1404
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M., Lewis M.L.;
RT   ;
RL   Submitted (06-NOV-2006) to the INSDC.
RL   Systematic Entomology Laboratory, USDA-ARS-PSI, 10300 Baltimore Avenue,
RL   Beltsville, MD 20705, USA
XX
DR   MD5; 9c76f7acbcb9e43957845657c5c72b91.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1404
FT                   /organism="Liriomyza brassicae"
FT                   /organelle="mitochondrion"
FT                   /host="ex. leafmine on Brassica"
FT                   /mol_type="genomic DNA"
FT                   /country="Sri Lanka:Gannoruwa"
FT                   /collected_by="A. Wijesekara"
FT                   /collection_date="Mar-1998"
FT                   /sex="male"
FT                   /note="authority: Liriomyza brassicae (Riley)"
FT                   /db_xref="taxon:341052"
FT   gene            <1..>1404
FT                   /gene="COI"
FT   CDS             <1..>1404
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:A1E3R2"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023615"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR033944"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A1E3R2"
FT                   /protein_id="ABL07665.1"
FT                   /translation="IRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNW
FT                   LVPLMLGAPDMAFPRMNNMSFWLLPPALTLLLMSSMVENGAGTGWTVYPPLSSIIAHGG
FT                   ASVDLAIFSLHLAGISSILGAVNFITTIINMRSTGISFDRMPLFVWSVLITAILLLLSL
FT                   PVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHII
FT                   SHESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAVPTG
FT                   IKIFSWLATLHGAQLSYTPSTLWSLGFVFLFTVGGLTGVILANSSIDVVLHDTYYVVAH
FT                   FHYVLSMGAVFAIMAGFIHWYPLFTGLSLNTKLLKSQFMIMFIGVNLTFFPQHFLGLAG
FT                   MPRRYSDYPDAYTAWNVISTIGSSISLLGIIFFLYIIWESMMTQRQVIFPVQLNSSIEW
FT                   YQNTPPAEHS"
XX
SQ   Sequence 1404 BP; 426 A; 247 C; 210 G; 521 T; 0 other;
     attcgagccg aattaggtca tccaggagct ttaattggag atgatcaaat ttataatgta        60
     attgtaactg ctcatgcttt tattataatt ttttttatag ttatacctat tataatcgga       120
     gggtttggaa actgactagt acctttaata ttaggagctc ctgatatagc ctttcctcga       180
     ataaataata taagtttttg attattaccc cctgctctta ccttattatt aataagcagt       240
     atagtggaaa acggggccgg aacaggatga acagtttatc ctcccctctc ttctattatt       300
     gctcacggtg gggcatctgt tgatctagct attttttcat tacaccttgc aggaatttct       360
     agaattttag gagcagtaaa ttttattaca acaattatta atatgcgatc tacaggaatt       420
     agatttgatc gaataccttt atttgtttga tctgttctta ttactgctat cttattactt       480
     ttatctttac cagttctagc aggagctatt acaatacttc taacagaccg aaattttaac       540
     acatcatttt ttgatcctgc aggaggtgga gacccaattt tatatcaaca cctattctga       600
     ttctttgggc acccagaagt ctacatttta attttaccag gatttggaat aatttctcac       660
     attattagtc atgagtcagg aaaaaaggaa actttcgggt ctttaggaat aatttatgct       720
     atattagcta ttggattatt aggatttatt gtttgagcac accacatatt tacagttgga       780
     ttagatgttg atactcgagc atatttcact tcagcaacaa taatcattgc agtaccaacc       840
     ggtattaaaa ttttcagttg actagctact cttcatggag cccaactttc ttatacacca       900
     tcaacccttt gatctcttgg ttttgtattt ttatttacag taggtggact aaccggagta       960
     attttagcaa attcatcaat tgatgtagtt ctacatgata cttactacgt agtagcccat      1020
     tttcactatg tattatcaat aggagcagta tttgctatta tagcaggatt tattcattga      1080
     tatcccttat ttacaggtct ttcattaaac actaaattat taaaaagtca atttataatt      1140
     atatttattg gagtaaattt aacttttttt ccacaacatt ttctaggatt agcaggaata      1200
     cctcgtcgat attctgatta ccctgacgca tatacagcat gaaatgtaat ttctacaatc      1260
     ggatcgtcta tctctttatt aggtattatt ttttttttat atattatctg agaaagcata      1320
     ataacccaac gacaagtaat ctttccagta caacttaact catcaattga atgataccaa      1380
     aacacacctc ctgcagaaca tagc                                             1404
//