ID   EF104653; SV 1; linear; genomic DNA; STD; INV; 1394 BP.
XX
AC   EF104653;
XX
DT   07-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 2)
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DE   Agromyza sp. Agvt cytochrome oxidase subunit I (COI) gene, partial cds;
DE   mitochondrial.
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KW   .
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OS   Agromyza sp. Agvt
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Opomyzoidea;
OC   Agromyzidae; Agromyzinae; Agromyza; unclassified Agromyza.
OG   Mitochondrion
XX
RN   [1]
RP   1-1394
RX   DOI; 10.1016/j.ympev.2006.12.018.
RX   PUBMED; 17291785.
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M.;
RT   "Phylogenetic relationships within the leaf-mining flies (Diptera:
RT   Agromyzidae) inferred from sequence data from multiple genes";
RL   Mol. Phylogenet. Evol. 42(3):756-775(2007).
XX
RN   [2]
RP   1-1394
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M., Lewis M.L.;
RT   ;
RL   Submitted (06-NOV-2006) to the INSDC.
RL   Systematic Entomology Laboratory, USDA-ARS-PSI, 10300 Baltimore Avenue,
RL   Beltsville, MD 20705, USA
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DR   MD5; 74f0b6ef4fc3e2353e7d2dd466f3ef74.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1394
FT                   /organism="Agromyza sp. Agvt"
FT                   /organelle="mitochondrion"
FT                   /host="ex. leafmine on yellow composite"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:VT Rutland Co. Rutland"
FT                   /collected_by="S. J. Scheffer 02-06"
FT                   /collection_date="Jul-2002"
FT                   /sex="male"
FT                   /db_xref="taxon:414312"
FT   gene            <1..>1394
FT                   /gene="COI"
FT   CDS             <1..>1394
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:A1E3L5"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023615"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR033944"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A1E3L5"
FT                   /protein_id="ABL07618.1"
FT                   /translation="AELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNWLV
FT                   PLMLGAPDMAFPRMNNMSFWLLPPALTLLLVSSMVENGAGTGWTVYPPLSSVIAHGGAS
FT                   VDLAIFSLHLAGISSILGAVNFITTVINMRSTGITFDRMPLFVWSVIITAFLLLLSLPV
FT                   LAGAITMLLTDRNFNTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHIISQ
FT                   ESGKKETFGALGMIYAMLAIGLLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAVPTGIK
FT                   IFSWLATLHGAQLSYSPSILWALGFVFLFTVGGLTGVILANSSIDIVLHDTYYVVAHFH
FT                   YVLSMGAVFAIMAGFVHWYPLFTGLTLNNKWLKSQFSVMFIGVNLTFFPQHFLGLAGMP
FT                   RRYSDYPDAYTTWNVISTIGSSISLLGIIMFLFIIWESLMSQRQVIFPIQLNSSIEWYQ
FT                   NTPPAE"
XX
SQ   Sequence 1394 BP; 387 A; 261 C; 235 G; 511 T; 0 other;
     gctgaattgg gccacccagg agcattaatc ggtgatgacc aaatttataa cgtaattgtt        60
     actgcccatg cttttattat aatttttttt atggtaatgc caattataat tggaggattc       120
     ggaaattggt tagtcccctt aatgctggga gccccagata tagcctttcc tcgaataaat       180
     aatataagtt tttgattact gccccctgct cttacacttt tattggtcag aagaatagtt       240
     gaaaacggag ctggcacagg atgaaccgtt tacccacctc tctcctcagt tatcgcacat       300
     ggaggagcat cagtagatct agctattttc tctttacatt tagctggtat ctcttcaatt       360
     ttaggggcag taaattttat tactactgta attaatatac gatctactgg aattaccttt       420
     gaccgaatac cactatttgt gtgatctgta attatcaccg cctttttact acttttatct       480
     ttaccagtac tggctggagc tattacaatg ttattaacag accgaaattt taacacgtca       540
     ttttttgatc ccgcaggtgg tggagaccct gtcctttacc agcatttatt ttgatttttt       600
     ggtcatccag aagtatatat tttaatttta cctgggtttg gtataatttc ccacattatt       660
     agacaagaat ctgggaaaaa ggaaactttt ggggccttag ggataattta cgcaatatta       720
     gctattgggt tattaggatt tatcgtatga gcacatcata tgttcacagt tggattagat       780
     gtagacaccc gagcatactt cacttctgcc acaataatta ttgctgttcc cactggaatt       840
     aaaattttca gttgattagc aaccttacat ggagctcaat taagctactc cccgtcaatt       900
     ttatgggctt taggtttcgt atttttattt actgtaggcg gattaactgg agttatttta       960
     gctaattctt ctattgacat tgttttacat gacacctatt atgtagtggc tcattttcat      1020
     tatgttttat caataggggc agtgttcgct attatggcag gatttgtcca ctgatacccc      1080
     ctattcacag gactaacttt aaataacaag tgattaaaaa gtcaattttc tgttatattt      1140
     attggagtta atttaacctt ttttcctcaa cattttttag gtttggctgg aatgcctcga      1200
     cgatattcag actaccctga tgcctacaca acatgaaatg ttatttctac gattggatcc      1260
     tcaatttctt tattaggaat tattatattt ttatttatta tttgagaaag tttaatatca      1320
     caacgtcaag ttattttccc tatccagcta aattcttcaa tcgaatgata ccaaaacacc      1380
     cctccagcag aaca                                                        1394
//