ID   EF104649; SV 1; linear; genomic DNA; STD; INV; 1404 BP.
XX
AC   EF104649;
XX
DT   07-DEC-2006 (Rel. 90, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 2)
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DE   Agromyza ambrosivora cytochrome oxidase subunit I (COI) gene, partial cds;
DE   mitochondrial.
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KW   .
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OS   Agromyza ambrosivora
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Opomyzoidea;
OC   Agromyzidae; Agromyzinae; Agromyza.
OG   Mitochondrion
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RN   [1]
RP   1-1404
RX   DOI; 10.1016/j.ympev.2006.12.018.
RX   PUBMED; 17291785.
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M.;
RT   "Phylogenetic relationships within the leaf-mining flies (Diptera:
RT   Agromyzidae) inferred from sequence data from multiple genes";
RL   Mol. Phylogenet. Evol. 42(3):756-775(2007).
XX
RN   [2]
RP   1-1404
RA   Scheffer S.J., Winkler I.S., Wiegmann B.M., Lewis M.L.;
RT   ;
RL   Submitted (06-NOV-2006) to the INSDC.
RL   Systematic Entomology Laboratory, USDA-ARS-PSI, 10300 Baltimore Avenue,
RL   Beltsville, MD 20705, USA
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DR   MD5; 6e3c637922ffccec775a961d347c5702.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1404
FT                   /organism="Agromyza ambrosivora"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:MD Prince George's Co. Candy Hill Road"
FT                   /collected_by="S. J. Scheffer"
FT                   /collection_date="Sep-2000"
FT                   /sex="male"
FT                   /note="authority: Agromyza ambrosivora Spencer"
FT                   /db_xref="taxon:414308"
FT   gene            <1..>1404
FT                   /gene="COI"
FT   CDS             <1..>1404
FT                   /codon_start=1
FT                   /transl_table=5
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:A1E3L1"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023615"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR033944"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A1E3L1"
FT                   /protein_id="ABL07614.1"
FT                   /translation="IRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMVMPIMIGGFGNW
FT                   LVPLMLGAPDMAFPRMNNMSFWLLPPALTLLLVSSMVENGAGTGWTVYPPLSSVIAHGG
FT                   ASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGITFDRMPLFVWSVIITAFLLLLSL
FT                   PVLAGAITMLLTDRNFNTSFFDPAGGGDPVLYQHLFWFFGHPEVYILILPGFGMISHII
FT                   SQESGKKETFGALGMIYAMLAIGLLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAVPTG
FT                   IKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAH
FT                   FHYVLSMGAVFAIMAGFIHWYPLFTGLNLNNKWLKSQFLIMFIGVNLTFFPQHFLGLAG
FT                   MPRRYSDYPDAYTTWNVISTIGSSISLFGIIMFLFIIWESLITQRQVIFPIQLNSSIEW
FT                   YQNTPPSEHS"
XX
SQ   Sequence 1404 BP; 408 A; 238 C; 221 G; 537 T; 0 other;
     attcgagctg aactaggaca tccaggagcc ctaatcggag atgaccaaat ttataatgta        60
     attgttactg cccatgcttt tattataatt ttttttatag ttatacccat cataattgga       120
     gggtttggta attgattagt acctcttata ttaggggccc cagatatagc ttttccacgg       180
     ataaacaata taagtttttg actattgccc cctgctctta ccttattgtt ggtaagaaga       240
     atagttgaaa acggagctgg tacgggatga actgtttacc cacctttatc ttcagtaatt       300
     gctcatggag gagcatcagt agatctagct attttttctt tacatttagc tggaatttca       360
     tctattttag gagctgtaaa tttcattaca acagttatta atatacgttc aactggaatt       420
     acatttgatc gaataccttt atttgtttga tcagtaatta ttactgcttt tttattactt       480
     ctttctttac ctgttctagc cggagctatt acaatattat taactgaccg aaattttaat       540
     acttcattct tcgaccctgc tggtggagga gaccctgttc tttaccaaca tttattttga       600
     ttttttgggc acccagaagt ttatatttta attttacctg gatttgggat gatttctcat       660
     attattagtc aagaatcagg aaaaaaggaa actttcggtg ctttaggaat aatttatgct       720
     atattagcta ttggactatt aggatttatt gtgtgagctc accatatatt tacagttgga       780
     ttagatgtag atacgcgagc atatttcact tcagctacta taattattgc cgtacctact       840
     ggaattaaaa tttttagttg attagcaact cttcacggaa cacaattatc ttattctcct       900
     gctattttat gagctttagg gtttgtcttt ttatttacag taggtggatt aacaggagta       960
     gttttagcaa attcttctat tgatattgta ttacacgata catactacgt agtagctcat      1020
     ttccattatg ttttatcaat aggggctgta tttgccatta tagcagggtt tatccattga      1080
     taccctttat ttactggatt aaatttaaat aataaatgat taaaaagtca atttttaatc      1140
     atattcattg gtgtaaattt aacttttttc cctcaacatt ttttaggcct agcagggata      1200
     cctcgacgat actcagatta ccctgatgca tacaccacat gaaatgtaat ttcaactatt      1260
     gggtcttcaa tctcattatt tggaattatc atatttttat tcattatttg agaaagatta      1320
     atcactcaac gccaagttat ttttcctatc caattaaact cttcaattga atgataccaa      1380
     aacactcctc cgtcagaaca caga                                             1404
//