ID DQ079905; SV 1; circular; genomic DNA; STD; PHG; 5529 BP. XX AC DQ079905; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage ID12, complete genome. XX KW . XX OS Enterobacteria phage ID12 OC Viruses; Microviridae; Bullavirinae; Gequatrovirus. XX RN [1] RP 1-5529 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-5529 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; 8ffd3997221a015a6a220eb1b679f03a. DR EuropePMC; PMC2746890; 19693424. DR EuropePMC; PMC2912467; 19726536. DR EuropePMC; PMC4627924; 26528406. XX FH Key Location/Qualifiers FH FT source 1..5529 FT /organism="Enterobacteria phage ID12" FT /mol_type="genomic DNA" FT /db_xref="taxon:338136" FT gene 59..1723 FT /gene="A" FT CDS 59..1723 FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LL96" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LL96" FT /protein_id="AAZ49335.1" FT /translation="MFKTHSDYFNKPNIDAIKPLVETAGMSVLTQSPNLRIWKQCNTRI FT KLLEEILAHYTNGIRRDDNGDFWMNPNSQLATTIAYRAHHKGHNPKFKQYPESFTLDDI FT ITGKPIPQSAPDELQLSDEIGEDYRLTVLSIIEELQECYDVLGQLDINNTIDHKPLGND FT HWDLLYEKPVYKHWYQLVSKRPLKDIRADYNYAKAKGIKDECSKILEESTMKSRRGFTV FT QRLMNAMRTAHTQGWYVVFDTLTLADDRLKDFYDNPNALRDYFRDIGRMVLTAEGRSVH FT DSSADCYQYFCVPEYGTQHGRLHFHAVHLMRTLPLGSLDPNFGKLVRTNRQINSLQNTW FT PYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKATSYMAVGFYVAKYVNKKSDIDMAA FT KGLGNKEWNNSLKTKINLIPKKVFRIRMSRNFGMKLLSMAHLSAETLMELTQVGYDVTP FT FNNILKQNAKKELRLRLAKKSVADVLEAQPVTTNLLKFMRNLTRTIGASSLQSFIASMT FT TKLTSTDISDETKTYVADAGITTANLRIKSKWTAGGK" FT gene 698..1723 FT /gene="A*" FT CDS 698..1723 FT /codon_start=1 FT /transl_table=11 FT /gene="A*" FT /product="gpA*" FT /function="shuts off host DNA synthesis" FT /db_xref="GOA:Q2LL95" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LL95" FT /protein_id="AAZ49336.1" FT /translation="MKSRRGFTVQRLMNAMRTAHTQGWYVVFDTLTLADDRLKDFYDNP FT NALRDYFRDIGRMVLTAEGRSVHDSSADCYQYFCVPEYGTQHGRLHFHAVHLMRTLPLG FT SLDPNFGKLVRTNRQINSLQNTWPYGYSMPIAVRYSQDAFSRAGWLWPVDTKGEPLKAT FT SYMAVGFYVAKYVNKKSDIDMAAKGLGNKEWNNSLKTKINLIPKKVFRIRMSRNFGMKL FT LSMAHLSAETLMELTQVGYDVTPFNNILKQNAKKELRLRLAKKSVADVLEAQPVTTNLL FT KFMRNLTRTIGASSLQSFIASMTTKLTSTDISDETKTYVADAGITTANLRIKSKWTAGG FT K" FT gene 1276..1638 FT /gene="B" FT CDS 1276..1638 FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LL94" FT /db_xref="InterPro:IPR003513" FT /db_xref="InterPro:IPR038149" FT /db_xref="UniProtKB/TrEMBL:Q2LL94" FT /protein_id="AAZ49337.1" FT /translation="MEQFTQNQNQPHTQESIQNPNVPQFRNETAINGSPVSGNSDGTDP FT SGIRRDPVQQHLEAERQERAQIEAGKEICRRRFGGATCDDQSAKIHAQFDPNNRSVQPT FT EFYRFNDHEINKYGYF" FT gene 1638..1808 FT /gene="K" FT CDS 1638..1808 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="InterPro:IPR020962" FT /db_xref="UniProtKB/TrEMBL:Q2LL93" FT /protein_id="AAZ49338.1" FT /translation="MKPKLTLLMQELLLLTYELNRSGLLVENEEIQSQLKKLEVVLLRN FT LSPSSQRAGKD" FT gene 1720..1974 FT /gene="C" FT CDS 1720..1974 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LL92" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LL92" FT /protein_id="AAZ49339.1" FT /translation="MRKFNLNLKNSRSSYFATFRHHLNVLAKTDALDEEKYLNMLGALL FT KDWFRYEEHFVHGKQSMLDILKERGLLSTTSTDTNHKGN" FT gene 1976..2434 FT /gene="D" FT CDS 1976..2434 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LL91" FT /db_xref="InterPro:IPR004196" FT /db_xref="InterPro:IPR036632" FT /db_xref="UniProtKB/TrEMBL:Q2LL91" FT /protein_id="AAZ49340.1" FT /translation="MSKSNESAVAFQTAIASIKLIQASSVLDLTEDDFDFLTRDRVWIA FT TDRSRARRAIEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIVNGVERPVKAAELFAFTLLVRAGNKDLIGHAETNIREQLRAQGVM" FT gene 2154..2465 FT /gene="E" FT CDS 2154..2465 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LL90" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LL90" FT /protein_id="AAZ49341.1" FT /translation="MEHWTLSGILAFLLLLSLLLPSLLIMFIPLTSKPPVSSWKVLSLP FT KTSSMVLNAQLRPLNCSPSLFSFAPATKTLSVMPKQTSVNNYALKELCNEKINSPLWW" FT gene 2433..2511 FT /gene="J" FT CDS 2434..2511 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LL89" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LL89" FT /protein_id="AAZ49342.1" FT /translation="MKKSIRRSGGKSKGARLWYVGGTQY" FT gene 2552..3835 FT /gene="F" FT CDS 2552..3835 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LL88" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR037002" FT /db_xref="UniProtKB/TrEMBL:Q2LL88" FT /protein_id="AAZ49343.1" FT /translation="MSNVQTSADRVPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECD FT MVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGVNAAPLTPVTCSSGW FT DSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPEQDYKWGVRV FT ANLKSIWTAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKE FT FGGHTSYDGDNRPLLLMRSEFWASGYDVDGTDQSSLGQFSGRVQQTFNHKVPRFYVPEH FT GVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVSLKEFFHSSPD FT SAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTELKDRVLVNTDNYDEIFQSMQ FT LAHWNMQTKFNINVYRHMPTTRDAIMTS" FT gene 3972..4505 FT /gene="G" FT CDS 3972..4505 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LL87" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2LL87" FT /protein_id="AAZ49344.1" FT /translation="MFQKFISKHNAPINSTQLSATKTPAATAPVLSVPGLSRSTIQINA FT TTTAVTTHSGLCHVVRIDETNPTNHHALSIAGSLSNVPADMIAFAIRFEVADGVVPTAV FT PALYDAYPIETFNNGKAISFKDAVTIDSHPRTVGNDVYAGIMLWSNAWTASTISGVLSV FT NQVNREAIVLQPLK" FT gene 4516..5529 FT /gene="H" FT CDS 4516..5529 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LL86" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LL86" FT /protein_id="AAZ49345.1" FT /translation="MFGAVAGGIASALAGGLTNKLFGGGQSANSTGVQGNILASDNNVI FT GANDAGIKSAIQGSTVPDSKQAAPSAISGVLADSGKHALSSLTNAGTNKLMEAVGLSKS FT ASDKGKDTKDYLASAFPELNPWERAGAGASGAGMQDAGFQNQKELTKMQLDNQKEIAKM FT QNETQKEIAGLQSVTSRENTKDTVYAQNEMLAYNQKESMSRVGAILENTSLTKQQQTSE FT IMRQMLTQAQTAGQHFTNEQIQELTRKVGADIDAVRANTARTHVETDRSKQEVQNSRYA FT SSQVGKTAKDVSNAVTDTASSIVDYFRGVDQKVADVYNNYFKDGKSKGIESNHRSK" XX SQ Sequence 5529 BP; 1518 A; 1463 C; 1098 G; 1450 T; 0 other; tgcttgacta atactcaatc accactctaa tatgcctccc atcaaacgga ggcttttcat 60 gtttaaaaca cattctgact acttcaacaa acctaacatc gacgctatca aacctctcgt 120 cgaaactgct ggtatgtctg ttcttactca atccccaaac ctccgtatct ggaaacagtg 180 taatactcgt atcaaactac tggaggaaat ccttgctcac tacacaaatg gtattcgccg 240 tgacgacaat ggtgacttct ggatgaatcc caactctcaa ctcgcaacca ctatcgccta 300 tcgtgctcac cacaaaggcc ataaccctaa attcaaacaa tatccagaat cctttactct 360 ggatgacatt attactggta aaccaatccc tcaatctgcc cctgacgaat tacaactctc 420 cgatgaaatc ggtgaagact atcgccttac agtcctctcc ataatcgaag aattgcaaga 480 atgctacgac gtgctcggac aacttgatat taataacact atagaccaca aacccctcgg 540 taatgaccac tgggacttac tctatgaaaa acccgtttac aaacactggt atcaactcgt 600 atcaaaacga ccccttaaag atatccgcgc cgattacaac tatgcaaagg cgaagggtat 660 taaggatgaa tgctcaaaaa tcttggagga atcaactatg aagtctcgac gtggctttac 720 cgttcaaaga ttaatgaatg ctatgcgtac tgcccatact cagggctggt atgttgtatt 780 cgatactctt actctagccg atgaccgctt aaaggatttc tatgataatc ccaatgctct 840 ccgtgactac ttccgtgata ttggtcgtat ggtgcttact gccgagggtc gctcggtgca 900 tgactcatct gccgactgct atcagtattt ttgtgtgcca gagtatggta cacagcacgg 960 tcgtctacat ttccacgcag tgcatcttat gcgcacactt cctttgggtt ctctggaccc 1020 taacttcggt aagctggtac gcactaatcg gcaaataaat agcttgcaaa acacatggcc 1080 ttatggttac tctatgccca tcgcagtccg gtactcccaa gacgcatttt ctcgcgctgg 1140 ctggctctgg cctgtggaca caaagggtga accccttaaa gctacctcgt atatggctgt 1200 aggcttctac gttgctaaat acgttaacaa aaaatcagat attgacatgg ccgcaaaagg 1260 cctagggaat aaagaatgga acaattcact caaaaccaaa atcaacctca tacccaagaa 1320 agtattcaga atccgaatgt cccgcaattt cggaatgaaa ctgctatcaa tggctcacct 1380 gtcagcggaa actctgatgg aactgaccca agtgggatac gacgtgaccc cgttcaacaa 1440 catcttgaag cagaacgcca agaaagagct cagattgagg ctggcaaaga aatctgtcgc 1500 cgacgttttg gaggcgcaac ctgtgacgac caatctgcta aaattcatgc gcaatttgac 1560 ccgaacaatc ggagcgtcca gcctacagag ttttatcgct tcaatgacca cgaaattaac 1620 aagtacggat atttctgatg aaaccaaaac ttacgttgct gatgcaggaa ttactactgc 1680 taacttacga attaaatcga agtggactgc tggtggaaaa tgaggaaatt caatctcaac 1740 ttaaaaaact cgaggtcgtc ttacttcgca acctttcgcc atcatctcaa cgtgctggca 1800 aagactgacg cccttgacga ggaaaaatac ctaaatatgc taggtgctct cctcaaagac 1860 tggttccggt acgaagaaca tttcgtgcat ggtaaacaat caatgcttga catactgaaa 1920 gaacgtggcc tattatccac aacgtcaact gacacaaacc acaaaggaaa ctgaaatgtc 1980 taaatcaaac gaatctgctg tagcctttca aactgctatt gcctctatca aacttattca 2040 agcctcttct gttctcgact tgacagagga cgactttgac tttttaactc gcgaccgtgt 2100 ctggattgct accgaccgct cacgcgctcg ccgtgctatc gaggcctgcg tatatggaac 2160 actggacttt gtcgggtatc ctcgctttcc tgctcctgtt gagtttattg ctgccgtcat 2220 tgcttattat gttcatcccg ttaacatcca aaccgcctgt ctcatcatgg aaggtgctga 2280 gtttaccgaa aacatcgtca atggtgttga acgcccagtt aaggccgctg aactgttcgc 2340 cttcactctt ctcgttcgcg ccggcaacaa agaccttatc ggtcatgccg aaacaaacat 2400 ccgtgaacaa ttacgcgctc aaggagttat gtaatgaaaa aatcaattcg ccgctctggt 2460 ggtaaatcca aaggtgctcg cctttggtat gtaggcggaa cacaatacta atctctcggg 2520 ggctacggcc ccccaattta aggatacaaa aatgtctaac gttcaaactt ctgcggaccg 2580 cgtacctcat gacttatctc accttgtctt tgaagctggt aaaatcggcc gtctcaaaac 2640 tatctcttgg acgcctgttg ttgctggtga ctctttcgag tgcgatatgg ttggcgctat 2700 tcgtctttcc cctcttcgtc gcggcctcgc tgttgactca cgtgttgata tcttttcttt 2760 ctacattcca caccgtcata tctacggtca gcagtggatt aactttatga aggatggcgt 2820 taatgccgct cctctcactc ctgttacctg ctcctctggc tgggactctg ctgcgtatct 2880 cggaactatt ccgtcctcta cgctcaaagt gcctaaattt ttacatcagg gctatctgaa 2940 tatttataat aactacttca aaccgccttg gtctgatgac ttaacttacg ctaacccatc 3000 taatatgcct gaacaggatt acaaatgggg cgtacgtgtc gctaacctga aatctatctg 3060 gaccgcgcca cttccaccgg atacccgtac atctgaaaac atgactactg gtacatccac 3120 tattgacatt atgggcctcc aagccgcata tgctaaatta catacggaac aggaacgtga 3180 ttacttcatg acccgttacc gtgacattat gaaagagttc ggcggtcata catcctatga 3240 tggtgacaat cgtcctcttc tgctcatgcg ctctgaattc tgggcctctg gctatgacgt 3300 agacggtact gaccaatctt ctctcggtca attctctggt cgcgttcagc agaccttcaa 3360 tcacaaagtg ccacgcttct atgttcctga gcatggcgta attatgactc tggcggttac 3420 tcgcttcccg cctactcatg aaatggaaat gcactatctt gtaggcaaag aaaacttaac 3480 ctataccgat attgcttgtg accctgcact gatggctaac ctgccacctc gtgaagtgtc 3540 cttaaaagaa ttcttccact cctcacccga ttctgctaaa ttcaaaatcg ctgagggcca 3600 atggtatcgc acacagcctg accgtgtcgc tttcccatat aacgctctgg acggcttccc 3660 gttctactcc gctctcccgt ccacggaatt gaaagaccgt gtactggtta acactgataa 3720 ctacgatgaa atcttccagt ctatgcagct tgcacactgg aatatgcaaa ctaaatttaa 3780 cattaacgtc taccgtcaca tgcctacgac tcgtgatgca atcatgacct cgtaacgcaa 3840 caaaggccgc ccctctactg gtcagatacc tgcccaatgt ggggcggacc gtgcctacgg 3900 agacacccga atctacgata catggacggc gaaagccgcc gtccctactg caaagccaaa 3960 aggaccaaca tatgttccag aaattcattt ctaagcacaa tgccccaatt aactctactc 4020 agctttctgc taccaaaaca ccggctgcca cggcacctgt tttatctgtg cctggcttaa 4080 gccgttctac tattcaaatc aatgcaacaa ccacagccgt tacaactcat tcaggcttgt 4140 gccacgttgt tcgcattgat gaaacaaacc caacaaatca tcatgctctg tctattgcag 4200 gttcgttgtc aaacgtccct gctgatatga ttgcttttgc cattcgtttt gaggtcgctg 4260 atggcgtcgt tccaactgcc gttccggcct tatacgacgc ctacccaatc gaaaccttca 4320 ataacggcaa agcaatctca tttaaagatg ctgttactat cgactcacat ccccgcactg 4380 tcggtaacga cgtttatgcg ggaatcatgc tctggtctaa cgcttggacc gcctctacta 4440 tctctggcgt cctctctgtt aatcaggtaa accgtgaagc tatcgtcctc caacctctga 4500 aataagggct atcctatgtt tggcgctgtc gctggtggta tcgcctccgc acttgctgga 4560 ggacttacaa ataaattatt tggcggcggt cagtccgcca attctaccgg agtgcaaggt 4620 aatatccttg cctccgacaa caatgttata ggtgctaatg atgccggtat taaatctgct 4680 attcagggct ctactgttcc tgactcgaaa caggctgccc cttctgcaat ctctggcgtt 4740 cttgccgact ctggcaagca tgcgctctcg tctcttacca atgctggtac aaataaactc 4800 atggaagctg tcggcctttc taaatctgcc tctgacaagg gcaaagacac aaaagactat 4860 ctcgcctccg cattccccga gctcaaccca tgggaacgtg ccggcgctgg tgcttctggt 4920 gcaggcatgc aagacgctgg tttccaaaat cagaaagagc taaccaaaat gcagcttgac 4980 aaccaaaagg aaatcgctaa gatgcaaaac gaaactcaga aggaaatcgc tgggcttcaa 5040 tctgttacat cacgcgaaaa taccaaggat actgtctatg ctcaaaatga aatgctcgcg 5100 tataaccaaa aagagtctat gtcacgcgtt ggcgctattc tcgaaaacac aagcctcacc 5160 aaacaacaac aaacttctga aattatgcgg caaatgctta ctcaagctca aaccgcaggt 5220 caacatttta caaatgagca aatccaagag cttacgcgaa aagttggtgc tgatattgat 5280 gctgttcgtg ctaacactgc acgcacccat gtagaaaccg accgctcaaa acaggaggtg 5340 caaaactccc gttatgcttc ttctcaggta ggcaaaaccg ctaaggacgt gtccaatgca 5400 gttactgata cagctagttc tattgttgat tattttcgtg gtgttgatca aaaagtggca 5460 gacgtttaca acaactattt caaagatggc aaatcgaaag gaatagaatc caatcaccgc 5520 tctaaataa 5529 //