ID DQ079871; SV 1; circular; genomic DNA; STD; PHG; 6071 BP. XX AC DQ079871; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage ID32, complete genome. XX KW . XX OS Escherichia phage ID32 OC Viruses; Microviridae; Bullavirinae; Alphatrevirus. XX RN [1] RP 1-6071 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-6071 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; 22d61007e32ab3faa3b77fdee575bf32. XX FH Key Location/Qualifiers FH FT source 1..6071 FT /organism="Escherichia phage ID32" FT /mol_type="genomic DNA" FT /db_xref="taxon:338102" FT gene 763..2247 FT /gene="A" FT CDS 763..2247 FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LMB2" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LMB2" FT /protein_id="AAZ48969.1" FT /translation="MATELFSDVVKATWSHATAKHPHLRMAVQVDNRSRLLSDLVYQLE FT KRLSEETHLDDETYALYESQTGLLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFLFE FT MICPGVRYGKTLNSLWTKYVAQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNR FT MTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRS FT VKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQINSFRG FT MWPYGFTQPIAVRYQHDAYSRKGWLWPVDKTGKAMQSKPYQAVAWYVTKYVAKQSDQRQ FT KAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPL FT YQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKNIRRLMKKTPEFNWQSSIASMTV FT TLKNGDISDEARQYIIDAGITPFDLRAKATQTFGGK" FT gene 1809..2162 FT /gene="B" FT CDS 1809..2162 FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LMB1" FT /db_xref="InterPro:IPR003513" FT /db_xref="InterPro:IPR038149" FT /db_xref="UniProtKB/TrEMBL:Q2LMB1" FT /protein_id="AAZ48970.1" FT /translation="MQESTYGNLSEKGIQSSQQPEARNGVTVDGASQQQSASGAEPNQL FT RFQPSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKYVEKYPSFDEKDTRVQLAEFY FT RFHDGHLKKWGYF" FT gene 2162..2323 FT /gene="K" FT CDS 2162..2323 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="UniProtKB/TrEMBL:Q2LMB0" FT /protein_id="AAZ48971.1" FT /translation="MKHVNTLLMQELRLLICELKRLKLSAVSDPDFSQEKIHAELDSLL FT RKLSRYFD" FT gene 2274..2480 FT /gene="C" FT CDS 2274..2480 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LMA9" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LMA9" FT /protein_id="AAZ48972.1" FT /translation="MLSSTRYYASYRATLTKQLMFLTKADFTDDDEKWLNAFGNLLRQW FT FQIEDWKGNHKKLLDDLKKRDYI" FT gene 2524..2982 FT /gene="D" FT CDS 2524..2982 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LMA8" FT /db_xref="InterPro:IPR004196" FT /db_xref="InterPro:IPR036632" FT /db_xref="UniProtKB/TrEMBL:Q2LMA8" FT /protein_id="AAZ48973.1" FT /translation="MSNLVATDVNFATSVAALKMLQASAVLDITEEDFDFLTGDKIWIA FT TDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIVNGVERPVKAAELFAYTLRVKAGFKETVLSAEENARQKLRASGVM" FT gene 2702..2932 FT /gene="E" FT CDS 2702..2932 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LMA7" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LMA7" FT /protein_id="AAZ48974.1" FT /translation="MERWTLWDTLAFLLLLSLLLPSLLIMFIPSTFRRPASSWKALSLR FT KTLLMASSVRLKPLSSSRTPCVLRLDSKKRF" FT gene 2984..3058 FT /gene="J" FT CDS 2984..3058 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LMA6" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LMA6" FT /protein_id="AAZ48975.1" FT /translation="MKKARRSPSRKKGARLWYVGGSQF" FT gene 3093..4376 FT /gene="F" FT CDS 3093..4376 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LMA5" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR037002" FT /db_xref="UniProtKB/TrEMBL:Q2LMA5" FT /protein_id="AAZ48976.1" FT /translation="MSNVQTSAERIPHDLSHLVFDAGKIGRLKVVSWTPVVAGDSFELD FT MIGAIRLSPLRRGLAVDSRVDLFTFYVPHRHVYGEQWIEFMKQGVDAAPLAPVQCSRGW FT DSAQYLATIPSSNLKVPKFLHQGYLNIYNNYFKAPWMDDLTYANPSNMEGEDVRFGVRA FT CNLKTIWTAPLPPDTETSHSMETETNSIDIMGLQAAYAQLHTEQERDYFMTRYRDIVNE FT FGGSTSYDADNRPLLVMHSEFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFCPEH FT GTMFTLALVRFPPTHEMEMHYLVGKEDLTYTDLACDPALMANLPPREVNMSQFFHSGSA FT SAKFKIAEGQWYRMQPDRVALPYNYLDGFPFYSAIPSNDIKQRVLVNTDNYDEVFQSMQ FT LAHWNMQTKFNCTIYRNMPTTRDSIMTS" FT gene 4414..4959 FT /gene="G" FT CDS 4414..4959 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LMA4" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q2LMA4" FT /protein_id="AAZ48977.1" FT /translation="MFQVYVSKHVAPFTSVNRAFSIAPAANPQVVNSGEIVAGRSTFRI FT ASSIGAPSNGSGFSFVQMMDPNSPDSQQVFSVAASLSFSVDSNYIPCVVRFESTVAQPT FT SFDIATADFIPVEASALSPRALSVRDCVTVDVKPRTEGNNVFVGVVFFSAAANAGNVTG FT VVSMAQVDHEVTALQPLK" FT gene 5094..6071 FT /gene="H" FT CDS 5094..6071 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LMA3" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LMA3" FT /protein_id="AAZ48978.1" FT /translation="MLGAVVGGIASALAGGAASKLFGGKPAAQAATESSGLSNGQGVIG FT MDQDAGIQSAIQGSNVPNGQIPAPTTTGGVMSDAGNMIKNAGKDLLDGVMTAGSDRVKQ FT ALIDKLGGNNAKRQGQATRDYLAAAFPELNAWERAGAGASGAGLESSSQDQQKELMRMQ FT LDNQKDIAKMQMQNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQARVESILANT FT DLTAKQATHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNARYGSSQV FT TAAAKDVTNMISDAAGGVADWASQQWNSFFKDGKSNGIPLNTRK" XX SQ Sequence 6071 BP; 1426 A; 1301 C; 1433 G; 1911 T; 0 other; ttgttgacat actctaatcc cttatgagac tcttgcttca acgaaatgac gcaggagtct 60 ttgcttatga aacccgcaca tcgcttaacc catccggtcc tcggttcttg gttgtttaag 120 tgccctgttt atatccgtta tgaacacctt catcatggtc gtcttattaa ggttcgtgcc 180 gttcgcgatt tgtcccctcg ccaacagctt attgctaacc ctaaaaattg ctttgatgtt 240 gttatcgctg agattgatgt tacctatggc tccatcactt ggtttgatta tgagcatgag 300 gagtatgacg agtttgatcc tgatgttata aatggcctcg ttaactacat tgatattcct 360 cacgttatcc gttctgagga agacccttct gtcgatattg atgatatgga ttggctttat 420 gaaattgcgg agtaaatcat ggaaactgtt gtcggaaaat ttattgcttt ggctattgtt 480 gctcttatgc tgtatggagt ttcccgtttg attagtagga cttgaaatga agtattttag 540 ccttgtggat gaacactatg cttattgccc tgattcgcgc attttgcaca tcactcgtag 600 tcgtgtttct gaccctcggt atgagcgtcg ttttcttact gatgaggagc attttgcgct 660 tttggattgg ttaaagagtc gcccaacata cattaattct tgacattcct ctaacccacc 720 ccttatagtg ccttcaaagt attactttga gggctttttc ctatggctac tgaattattc 780 tctgacgttg taaaagctac gtggtctcac gctactgcta agcaccctca ccttcgcatg 840 gctgtacagg ttgataatcg cagtcgtctt ctctctgatt tggtttacca gctggaaaaa 900 cgcctctctg aagagactca tctggatgat gagacttatg ccctttatga atctcaaacc 960 ggtcttttgg aagaccatat ggcgctggtt cggaagtgtg ctgcccaact tgataatagt 1020 aacactatag accaccgtac ccctttggat gccgaatgtg ttttcctgtt tgaaatgatt 1080 tgcccaggtg ttcgttacgg taaaacgttg aattctcttt ggactaagta tgttgctcaa 1140 tggcctgaga agttgattcg tcaagagtta gacatggtta agcctttgtc ctttaaggat 1200 gaagttgcta agtacatgga gaagatgcag gaaaaaacac gcaaaaatcg catgactcaa 1260 aaagtaatta atgagatgcg tatcgctcac caaaagggct ggtttttcgt atttgatacg 1320 ttgacacttg ctgatgaccg tttgcaggct tttaatgaaa accccaatgc tcttcgtgat 1380 tatttcagga ctgttggtcg agctgttctg cgcgctgaag gtcgttcggt taaggattcc 1440 tacaacgact gctatcgcta tctttgtgtg ccggagtttg gaggccagca tggccgtctt 1500 cattggcacg ttgtgcatat ggtgcggact cttcctttgg gaagtcacga ccctaatttc 1560 ggtcgcaagg ttcgtaatta tcgccagatt aactcgttcc gtggaatgtg gccttatggc 1620 tttacgcaac cgatagctgt acgctatcaa catgatgctt attctcgtaa aggttggctg 1680 tggcctgttg acaaaacagg aaaagcaatg cagagtaagc cctatcaggc ggtcgcatgg 1740 tatgtgacca aatatgtggc taagcaatct gaccagcgtc agaaagctat tactgagaga 1800 caaaaaaaat gcaagaatcc acttatggca atctgtctga aaaaggaatt cagagttcgc 1860 agcagccgga agctcggaat ggagttaccg tcgatggcgc atctcagcaa caaagtgctt 1920 ctggagctga gccgaatcag cttcgattcc agccctctgt atcagatagt gaaagagaac 1980 gccaaaaagc aattgacctt gaacatcggc gcgctgcctt tgcacgtcat tttggatgtg 2040 cgcccggaag tgagaagtat gttgaaaaat atccgtcgtt tgatgaaaaa gacacccgag 2100 ttcaattggc agagttctat cgcttccatg acggtcacct taaaaaatgg ggatatttct 2160 gatgaagcac gtcaatacat tattgatgca ggaattacgc cttttgattt gcgagctaaa 2220 gcgactcaaa ctttcggcgg taagtgaccc ggatttttct caggagaaga ttcatgctga 2280 gctcgactcg ttactacgca agttatcgcg ctactttgac taagcagctg atgtttttga 2340 ctaaagctga ctttaccgat gatgatgaaa aatggcttaa tgcctttggt aatttgctcc 2400 gtcagtggtt tcagattgag gattggaaag gtaatcataa aaaattgctt gacgatttaa 2460 aaaaacgtga ttacatttga gctgtttcaa ggtttcttac ccattaaatg ttaggagaat 2520 gttatgtcta atcttgttgc tactgatgtt aatttcgcta cttctgttgc tgctctgaaa 2580 atgcttcagg cttcagctgt tttggatatt actgaagagg atttcgattt ccttactggt 2640 gataaaattt ggattgctac cgaccgcaac cgtgcgcgtc gctgtgttga ggcttgtgtt 2700 tatggaacgc tggactttgt gggataccct cgctttcctg ctcctgttga gtttattgct 2760 gccgtcattg cttattatgt tcatcccgtc aacattcaga cggcctgcct catcatggaa 2820 ggcgctgagt ttacggaaaa cattgttaat ggcgtcgagc gtccggttaa agccgctgag 2880 ctcttcgcgt acaccttgcg tgttaaggct ggattcaaag aaacggttct gagcgctgaa 2940 gagaatgctc gtcagaaact tcgtgcaagt ggagtaatgt aatatgaaga aagctcgtcg 3000 ttccccttct cgtaagaaag gtgcccgtct ctggtatgta ggcggttctc aattttaatt 3060 aatggggctt cggcccctat aaggattttt aaatgtcaaa tgtacagact tccgctgaac 3120 gtatccctca tgacctgtct catctggttt ttgatgcagg caaaattggt cgtttaaaag 3180 ttgtttcttg gactcctgtt gttgcaggtg attcttttga gcttgatatg attggcgcta 3240 ttcgcctttc tccgcttcgt cgtggccttg ctgttgactc tcgcgttgac ctgttcacgt 3300 tttatgtccc tcatcgtcat gtatatggtg agcagtggat tgagtttatg aagcaaggtg 3360 ttgatgctgc tcctttggcc cctgttcagt gctctcgtgg ttgggatagt gctcagtatc 3420 ttgctactat tccgtctagt aacttaaagg ttcctaagtt tcttcatcaa ggttacctga 3480 acatttacaa taactacttt aaagctccgt ggatggatga cctgacttat gccaacccgt 3540 ccaatatgga aggtgaagat gttcgttttg gtgttcgtgc atgtaacttg aaaactattt 3600 ggaccgctcc gcttcctccg gatactgaaa cctctcattc tatggagact gaaaccaact 3660 ccattgatat tatgggtttg caggccgctt atgctcaatt acatactgag caggagcgtg 3720 attacttcat gactcgttat cgtgatattg ttaacgaatt tggtggtagc acttcttatg 3780 atgcggataa tcgtcctttg cttgttatgc actctgagtt ctgggcctca ggctatgacg 3840 tcgacggcac cgaccaaagt tctcttggtc agttctccgg tcgtgtacag cagaccttta 3900 agcattcagt accgcgattc ttctgccctg agcatggtac tatgttcaca ctcgcattgg 3960 tccgcttccc gccgactcat gaaatggaga tgcattattt agttggtaaa gaagatttga 4020 cttatactga tttggcttgt gaccctgctt tgatggctaa cttgcctccg cgtgaggtta 4080 atatgtctca gttcttccat tctggaagtg ctagcgctaa gtttaagatc gctgaaggtc 4140 agtggtatcg tatgcagcct gaccgcgttg cattgccgta taactatctt gatggttttc 4200 cgttctatag tgcgattccg tctaatgata ttaaacagcg tgttctggtt aatactgata 4260 actacgatga ggttttccag tctatgcaac ttgctcactg gaatatgcag actaagttca 4320 actgcacgat ttatcgtaat atgccgacca ctcgcgactc tattatgacc tcttgattat 4380 gtggggcttc ggcccccttt aaggattttg attatgtttc aagtttatgt atctaaacat 4440 gttgctccgt tcacctctgt gaatcgtgcc ttttctattg cccctgctgc caatccgcag 4500 gttgttaact ctggtgagat tgttgcaggt cgttccactt tccgtattgc gtcttccatt 4560 ggtgctcctt ctaatggtag tggtttttcg tttgttcaga tgatggaccc taactctcct 4620 gattctcagc aggttttttc tgttgctgct tcgttgtcct ttagtgttga ttcgaattat 4680 attccttgtg ttgttcgttt tgagagcact gttgctcagc ctaccagctt tgatattgca 4740 accgctgatt ttattccggt tgaggcttct gccctttctc ctcgtgcgct tagcgttcgc 4800 gattgtgtta ccgttgatgt taagcctcgt actgaaggca ataatgtttt tgttggtgtg 4860 gttttcttct ctgctgccgc taatgctggt aatgtcactg gtgttgtttc gatggctcag 4920 gttgaccacg aagttacagc tttgcagccg cttaaataaa aggctgccgc actcccggtt 4980 agatgcctgc ccagtgtagg gcagaccgag ccgtacggag atacccgata aactaggaac 5040 gtggaaggcg caagccgcct tccctcctgc taagcccaaa aggagttaca gcgatgttag 5100 gtgccgttgt aggtggtatt gcttcagcct tagctggtgg agccgcttct aagctgtttg 5160 gtggtaaacc tgccgctcaa gccgctaccg agtcctctgg cctttctaat ggtcaaggtg 5220 ttattggtat ggatcaagat gccggtattc agtccgctat tcagggctca aatgtcccaa 5280 atggtcagat tcctgctccc actaccacag gcggtgttat gtctgatgct ggcaatatga 5340 ttaagaatgc tggtaaagat ttgcttgatg gtgtcatgac tgctggtagt gaccgagtta 5400 agcaggcttt gattgataag ttaggtggca ataatgcaaa gagacaagga caagcaaccc 5460 gtgattactt ggctgcggcc ttccctgagc tcaacgcatg ggagcgtgct ggagctggtg 5520 cttccggcgc cggtttggaa tcttccagcc aggaccaaca gaaagaatta atgcggatgc 5580 agctggacaa ccagaaagat attgcgaaga tgcagatgca gaataatttg cagattgcag 5640 gcatccagtc cgctacttct cgtcaaaata cgaaggattc tgtttatgct cagaatgaaa 5700 tgcttcagta caatcagcgt gagtcgcaag cgcgtgttga gtccatcctt gccaacactg 5760 accttacggc taaacaggcc acccatgaaa ttatgagaat ggctcttact cgtgctcagg 5820 aaactggtca gcatttgact aactctcaga ttatggcatt ggagaaaaag gtttatgcag 5880 aaatcggaaa aattcaccaa gatactcaaa acgctcgtta tggtagctct caagttactg 5940 ctgcggcgaa agatgttaca aatatgattt ctgatgctgc tggtggtgtt gccgattggg 6000 cttctcagca gtggaattct ttctttaagg atggcaagtc taatggtatt cctttaaata 6060 cccgaaaata g 6071 //