ID   CM130968; SV 1; circular; genomic DNA; CON; XXX; 7070828 BP.
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AC   CM130968; ABKYFG050000000;
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PR   Project:PRJNA288601;
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DT   18-NOV-2025 (Created)
DT   18-NOV-2025 (Last updated)
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DE   Pseudomonas aeruginosa strain 2023HL-00183 chromosome, complete sequence,
DE   whole genome shotgun sequence.
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KW   WGS.
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OS   Pseudomonas aeruginosa
OC   Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
OC   Pseudomonadales; Pseudomonadaceae; Pseudomonas.
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RN   [1]
RP   1-7070828
RG   Clinical and Environmental Microbiology Branch: Whole genome sequencing antimicrobial resistance pathogens in the healthcare setting
RA   ;
RT   ;
RL   Submitted (08-MAR-2023) to the INSDC.
RL   Division of Healthcare Quality Promotion, US Centers for Disease Control
RL   and Prevention, 1600 Clifton Rd, Atlanta, GA, USA
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RN   [2]
RP   1-7070828
RA   Ikhimiukor O.;
RT   ;
RL   Submitted (11-FEB-2025) to the INSDC.
RL   Bacterial Diseases Laboratory, Wadsworth Centre, New York State Department
RL   of Health, 120 New Scotland Ave, New York, ALBANY 12208, USA
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DR   BioSample; SAMN33610529.
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CC   The annotation was added by the NCBI Prokaryotic Genome Annotation
CC   Pipeline (PGAP). Information about PGAP can be found here:
CC   https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
CC   
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method        :: dragonflye v. 1.2.1
CC   Genome Representation  :: Full
CC   Expected Final Version :: Yes
CC   Genome Coverage        :: 50x
CC   Sequencing Technology  :: Oxford Nanopore
CC   ##Genome-Assembly-Data-END##
CC   
CC   ##Genome-Annotation-Data-START##
CC   Annotation Provider               :: NCBI
CC   Annotation Date                   :: 11/12/2025 10:04:16
CC   Annotation Pipeline               :: NCBI Prokaryotic Genome
CC   Annotation Pipeline (PGAP)
CC   Annotation Method                 :: Best-placed reference protein
CC   set; GeneMarkS-2+
CC   Annotation Software revision      :: 6.10
CC   Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
CC   Genes (total)                     :: 6,650
CC   CDSs (total)                      :: 6,570
CC   Genes (coding)                    :: 6,461
CC   CDSs (with protein)               :: 6,461
CC   Genes (RNA)                       :: 80
CC   rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
CC   complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
CC   tRNAs                             :: 64
CC   ncRNAs                            :: 4
CC   Pseudo Genes (total)              :: 109
CC   CDSs (without protein)            :: 109
CC   Pseudo Genes (ambiguous residues) :: 0 of 109
CC   Pseudo Genes (frameshifted)       :: 49 of 109
CC   Pseudo Genes (incomplete)         :: 64 of 109
CC   Pseudo Genes (internal stop)      :: 11 of 109
CC   Pseudo Genes (multiple problems)  :: 13 of 109
CC   ##Genome-Annotation-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..7070828
FT                   /organism="Pseudomonas aeruginosa"
FT                   /host="Homo sapiens"
FT                   /strain="2023HL-00183"
FT                   /mol_type="genomic DNA"
FT                   /geo_loc_name="USA"
FT                   /isolation_source="sputum"
FT                   /collection_date="2023"
FT                   /db_xref="taxon:287"
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CO   join(ABKYFG050000001.1:1..7070828)
//