ID   CM000672; SV 2; linear; genomic DNA; CON; HUM; 133797422 BP.
XX
AC   CM000672;
XX
PR   Project:PRJNA31257;
XX
DT   09-MAR-2009 (Rel. 100, Created)
DT   15-MAY-2014 (Rel. 120, Last updated, Version 4)
XX
DE   Homo sapiens chromosome 10, GRCh38 reference primary assembly.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RC   Erratum:[Nature 2001 Aug 2;412(6846):565]
RP   1-133797422
RX   DOI; 10.1038/35057062.
RX   PUBMED; 11237011.
RG   International Human Genome Sequencing Consortium
RA   Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J.,
RA   Devon K., Dewar K., Doyle M., FitzHugh W., Funke R., Gage D., Harris K.,
RA   Heaford A., Howland J., Kann L., Lehoczky J., LeVine R., McEwan P.,
RA   McKernan K., Meldrim J., Mesirov J.P., Miranda C., Morris W., Naylor J.,
RA   Raymond C., Rosetti M., Santos R., Sheridan A., Sougnez C.,
RA   Stange-Thomann N., Stojanovic N., Subramanian A., Wyman D., Rogers J.,
RA   Sulston J., Ainscough R., Beck S., Bentley D., Burton J., Clee C.,
RA   Carter N., Coulson A., Deadman R., Deloukas P., Dunham A., Dunham I.,
RA   Durbin R., French L., Grafham D., Gregory S., Hubbard T., Humphray S.,
RA   Hunt A., Jones M., Lloyd C., McMurray A., Matthews L., Mercer S., Milne S.,
RA   Mullikin J.C., Mungall A., Plumb R., Ross M., Shownkeen R., Sims S.,
RA   Waterston R.H., Wilson R.K., Hillier L.W., McPherson J.D., Marra M.A.,
RA   Mardis E.R., Fulton L.A., Chinwalla A.T., Pepin K.H., Gish W.R.,
RA   Chissoe S.L., Wendl M.C., Delehaunty K.D., Miner T.L., Delehaunty A.,
RA   Kramer J.B., Cook L.L., Fulton R.S., Johnson D.L., Minx P.J., Clifton S.W.,
RA   Hawkins T., Branscomb E., Predki P., Richardson P., Wenning S., Slezak T.,
RA   Doggett N., Cheng J.F., Olsen A., Lucas S., Elkin C., Uberbacher E.,
RA   Frazier M., Gibbs R.A., Muzny D.M., Scherer S.E., Bouck J.B.,
RA   Sodergren E.J., Worley K.C., Rives C.M., Gorrell J.H., Metzker M.L.,
RA   Naylor S.L., Kucherlapati R.S., Nelson D.L., Weinstock G.M., Sakaki Y.,
RA   Fujiyama A., Hattori M., Yada T., Toyoda A., Itoh T., Kawagoe C.,
RA   Watanabe H., Totoki Y., Taylor T., Weissenbach J., Heilig R., Saurin W.,
RA   Artiguenave F., Brottier P., Bruls T., Pelletier E., Robert C., Wincker P.,
RA   Smith D.R., Doucette-Stamm L., Rubenfield M., Weinstock K., Lee H.M.,
RA   Dubois J., Rosenthal A., Platzer M., Nyakatura G., Taudien S., Rump A.,
RA   Yang H., Yu J., Wang J., Huang G., Gu J., Hood L., Rowen L., Madan A.,
RA   Qin S., Davis R.W., Federspiel N.A., Abola A.P., Proctor M.J., Myers R.M.,
RA   Schmutz J., Dickson M., Grimwood J., Cox D.R., Olson M.V., Kaul R.,
RA   Raymond C., Shimizu N., Kawasaki K., Minoshima S., Evans G.A.,
RA   Athanasiou M., Schultz R., Roe B.A., Chen F., Pan H., Ramser J.,
RA   Lehrach H., Reinhardt R., McCombie W.R., de la Bastide M., Dedhia N.,
RA   Blocker H., Hornischer K., Nordsiek G., Agarwala R., Aravind L.,
RA   Bailey J.A., Bateman A., Batzoglou S., Birney E., Bork P., Brown D.G.,
RA   Burge C.B., Cerutti L., Chen H.C., Church D., Clamp M., Copley R.R.,
RA   Doerks T., Eddy S.R., Eichler E.E., Furey T.S., Galagan J., Gilbert J.G.,
RA   Harmon C., Hayashizaki Y., Haussler D., Hermjakob H., Hokamp K., Jang W.,
RA   Johnson L.S., Jones T.A., Kasif S., Kaspryzk A., Kennedy S., Kent W.J.,
RA   Kitts P., Koonin E.V., Korf I., Kulp D., Lancet D., Lowe T.M.,
RA   McLysaght A., Mikkelsen T., Moran J.V., Mulder N., Pollara V.J.,
RA   Ponting C.P., Schuler G., Schultz J., Slater G., Smit A.F., Stupka E.,
RA   Szustakowski J., Thierry-Mieg D., Thierry-Mieg J., Wagner L., Wallis J.,
RA   Wheeler R., Williams A., Wolf Y.I., Wolfe K.H., Yang S.P., Yeh R.F.,
RA   Collins F., Guyer M.S., Peterson J., Felsenfeld A., Wetterstrand K.A.,
RA   Patrinos A., Morgan M.J., de Jong P., Catanese J.J., Osoegawa K.,
RA   Shizuya H., Choi S., Chen Y.J.;
RT   "Initial sequencing and analysis of the human genome";
RL   Nature 409(6822):860-921(2001).
XX
RN   [2]
RP   1-133797422
RX   DOI; 10.1038/nature02462.
RX   PUBMED; 15164054.
RA   Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L.,
RA   Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K.,
RA   Hunt S.E., Andrews T.D., Gilbert J.G., Swarbreck D., Ashurst J.L.,
RA   Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P., Ashwell R.I.,
RA   Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R.,
RA   Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., Burford D.C.,
RA   Burrill W., Burton J., Cahill P., Camire D., Carter N.P., Chapman J.C.,
RA   Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., Coulson A., Dhami P.,
RA   Dutta I., Dunn M., Faulkner L., Frankish A., Frankland J.A., Garner P.,
RA   Garnett J., Gribble S., Griffiths C., Grocock R., Gustafson E., Hammond S.,
RA   Harley J.L., Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J.,
RA   Howden P.J., Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M.,
RA   Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S.,
RA   Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M., Loveland J.,
RA   Lovell J., McLaren S., McLay K.E., McMurray A., Mashreghi-Mohammadi M.,
RA   Matthews L., Milne S., Nickerson T., Nguyen M., Overton-Larty E.,
RA   Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.,
RA   Rice C.M., Rogosin A., Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R.,
RA   Skuce C.D., Smith M., Standring L., Sycamore N., Tester J., Thorpe A.,
RA   Torcasso W., Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H.,
RA   Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L.,
RA   Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K., Siebert R.,
RA   Fechtel K., Bentley D., Durbin R., Hubbard T., Doucette-Stamm L., Beck S.,
RA   Smith D.R., Rogers J.;
RT   "The DNA sequence and comparative analysis of human chromosome 10";
RL   Nature 429(6990):375-381(2004).
XX
RN   [3]
RP   1-133797422
RX   DOI; 10.1038/nature03001.
RX   PUBMED; 15496913.
RG   International Human Genome Sequencing Consortium
RA   ;
RT   "Finishing the euchromatic sequence of the human genome";
RL   Nature 431(7011):931-945(2004).
XX
RN   [4]
RP   1-133797422
RG   Genome Reference Consortium
RA   ;
RT   ;
RL   Submitted (17-DEC-2013) to the INSDC.
RL   NCBI, NIH, Bethesda, MD 20892, USA
XX
DR   MD5; c0eeee7acfdaf31b770a509bdaa6e51a.
DR   ENA; ABBA01000000; SET.
DR   ENA; ABBA00000000; SET.
DR   Ensembl-Scaffolds; 10:1-133797422; homo_sapiens.
DR   EuropePMC; PMC6624845; 30789418.
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CC   On Dec 20, 2013 this sequence version replaced gi:224384759.
CC   The DNA sequence is composed of genomic sequence, primarily
CC   finished clones that were sequenced as part of the Human Genome
CC   Project. PCR products and WGS shotgun sequence have been added
CC   where necessary to fill gaps or correct errors. All such additions
CC   are manually curated by GRC staff. For more information see:
CC   http://genomereference.org.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..133797422
FT                   /organism="Homo sapiens"
FT                   /chromosome="10"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   assembly_gap    1..10000
FT                   /estimated_length=10000
FT                   /gap_type="telomere"
FT   assembly_gap    39636683..39686682
FT                   /estimated_length=50000
FT                   /gap_type="between scaffolds"
FT   centromere      39686683..41593521
FT                   /note="Linear centromere model derived predominantly from
FT                   reads generated in PMID: 17803354. This region does not
FT                   represent an actual centromere sequence, as long-range
FT                   ordering of repeats and unmapped WGS contigs is not
FT                   provided by the model. For details of model production, see
FT                   http://arxiv.org/abs/1307.0035."
FT   assembly_gap    39935901..39936000
FT                   /estimated_length=100
FT                   /gap_type="between scaffolds"
FT   assembly_gap    41497441..41497540
FT                   /estimated_length=100
FT                   /gap_type="between scaffolds"
FT   assembly_gap    41545721..41545820
FT                   /estimated_length=100
FT                   /gap_type="between scaffolds"
FT   assembly_gap    41593522..41693521
FT                   /estimated_length=100000
FT                   /gap_type="between scaffolds"
FT   assembly_gap    133787423..133797422
FT                   /estimated_length=10000
FT                   /gap_type="telomere"
XX
CO   join(gap(10000),GL000093.2:1..39626682,gap(50000),KI270408.1:1..249218,
CO   gap(100),KI270409.1:1..1561440,gap(100),KI270410.1:1..48180,gap(100),
CO   KI270413.1:1..47701,gap(100000),GL000099.2:1..92093901,gap(10000))
//