ID CM000216; SV 2; linear; genomic DNA; CON; MUS; 130604219 BP. XX AC CM000216; XX PR Project:PRJNA11785; XX DT 23-SEP-2006 (Rel. 89, Created) DT 27-JUN-2007 (Rel. 92, Last updated, Version 4) XX DE Mus musculus chromosome 8, whole genome shotgun sequence. XX KW . XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RC Erratum:[Science 2002 Aug 23;297(5585):1278] RP 1-130604219 RX DOI; 10.1126/science.1069193. RX PUBMED; 12040188. RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., RA Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., RA Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W., RA Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., RA Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., RA Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., RA Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., RA Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., RA Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., RA Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., RA Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., RA Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., RA Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., RA Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., RA Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., RA Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., RA Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., RA Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., RA Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., RA Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., RA Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., RA MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., RA Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., RA Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., RA Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., RA Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., RA Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., RA Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., RA Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., RA Pfannkoch C.M., Barnstead M., Stephenson L.D.; RT "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the RT human genome"; RL Science, e1252229 296(5573):1661-1671(2002). XX RN [2] RP 1-130604219 RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RT ; RL Submitted (05-JUL-2005) to the INSDC. RL Celera Genomics, 45 W. Gude Dr., Rockville, MD 20850, USA XX RN [3] RP 1-130604219 RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.; RT ; RL Submitted (02-SEP-2005) to the INSDC. RL Celera Genomics, 45 W. Gude Dr., Rockville, MD 20850, USA XX DR MD5; 3a384eb366aec05f8ca60656f2ae4448. DR ENA; AAHY01000000; SET. DR ENA; AAHY00000000; SET. DR BioSample; SAMN03004379. XX CC On Sep 7, 2005 this sequence version replaced gi:71917952. CC This is the July 2001 combined whole genome shotgun assembly of Mus CC musculus. It contains 27 million Celera reads on four Mus musculus CC strains (129X1/SvJ, 129S1/SvImJ, DBA/2J and A/J), 13 million reads CC on C57BL/6 from the NCBI Trace Archive, 0.4 million BAC end CC sequences from TIGR, and unfinished and finished BACs pulled from CC NCBI (Nature 2002. 420:520-562). The assembly process relied on CC Celera's paired reads and BAC end reads for long range order and CC orientation. Its scaffolds were mapped to chromosomes using STS CC maps. For more detailed information about whole genome sequencing CC and Celera's assembly process, please refer to Venter, J.C. et al. CC Science 2001. 291:1304-1351. XX FH Key Location/Qualifiers FH FT source 1..130604219 FT /organism="Mus musculus" FT /chromosome="8" FT /strain="mixed" FT /mol_type="genomic DNA" FT /db_xref="taxon:10090" FT assembly_gap 31317..299376 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 16845897..17113956 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 17133762..17401821 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 17417715..17685774 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 17704002..17972061 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 18243879..18511938 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 18524182..18792241 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 18799237..19067296 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 19331257..19599316 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 19631727..19899786 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 19928315..20196374 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 31593282..31861341 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 31862442..32130501 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 32133192..32401251 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 32404542..32672601 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 54806183..55074242 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 71292712..71560771 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 71579842..71847901 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 71858545..72126604 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 72141278..72409337 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 72417246..72685305 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 72686410..72954469 FT /estimated_length=268060 FT /gap_type="unknown" FT assembly_gap 72955696..73223755 FT /estimated_length=268060 FT /gap_type="unknown" XX CO join(DS033264.1:1..31316,gap(268060),CH466566.1:1..16546520,gap(268060), CO CH466750.1:1..19805,gap(268060),DS033275.1:1..15893,gap(268060), CO CH466754.1:1..18227,gap(268060),CH466681.2:1..271817,gap(268060), CO CH466783.1:1..12243,gap(268060),DS033303.1:1..6995,gap(268060), CO CH466683.1:1..263960,gap(268060),DS033263.1:1..32410,gap(268060), CO CH466722.1:1..28528,gap(268060),CH466580.2:1..11396907,gap(268060), CO DS033487.1:1..1100,gap(268060),DS033363.1:1..2690,gap(268060), CO DS033341.1:1..3290,gap(268060),CH466554.1:1..22133581,gap(268060), CO CH466569.1:1..16218469,gap(268060),CH466751.1:1..19070,gap(268060), CO CH466794.1:1..10643,gap(268060),CH466768.2:1..14673,gap(268060), CO CH466803.1:1..7908,gap(268060),DS033486.1:1..1104,gap(268060), CO DS033460.1:1..1226,gap(268060),CH466525.1:1..57380464) //