ID   AY942174; SV 1; linear; genomic DNA; STD; PLN; 1333 BP.
XX
AC   AY942174;
XX
DT   02-MAR-2006 (Rel. 87, Created)
DT   03-JUN-2006 (Rel. 88, Last updated, Version 3)
XX
DE   Halimeda opuntia ribulose-1,5-bisphosphate carboxylase/oxygenase large
DE   subunit (rbcL) gene, partial cds; chloroplast.
XX
KW   .
XX
OS   Halimeda opuntia
OC   Eukaryota; Viridiplantae; Chlorophyta; Ulvophyceae; TCBD clade;
OC   Bryopsidales; Halimedaceae; Halimeda.
OG   Plastid:Chloroplast
XX
RN   [1]
RP   1-1333
RA   Lam D.W., Zechman F.W.;
RT   "Phylogenetic Analyses of the Bryopsidales (Ulvophyceae, Chlorophyta) Based
RT   on RUBISCO Large Subunit Gene Sequences";
RL   J. Phycol. 42(3):669-678(2006).
XX
RN   [2]
RP   1-1333
RG   Central Valley Algal Research
RA   Lam D.W., Zechman F.;
RT   ;
RL   Submitted (23-FEB-2005) to the INSDC.
RL   Biology, California State University, Fresno, 2555 East San Ramon Ave.,
RL   Fresno, CA 93740, USA
XX
DR   MD5; c6ec1d4232bba05e26607d19b0113a92.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1333
FT                   /organism="Halimeda opuntia"
FT                   /organelle="plastid:chloroplast"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:118223"
FT   gene            <1..>1333
FT                   /gene="rbcL"
FT   CDS             <1..>1333
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="rbcL"
FT                   /product="ribulose-1,5-bisphosphate carboxylase/oxygenase
FT                   large subunit"
FT                   /db_xref="GOA:Q9GHH2"
FT                   /db_xref="InterPro:IPR000685"
FT                   /db_xref="InterPro:IPR017443"
FT                   /db_xref="InterPro:IPR020878"
FT                   /db_xref="InterPro:IPR020888"
FT                   /db_xref="InterPro:IPR033966"
FT                   /db_xref="InterPro:IPR036376"
FT                   /db_xref="InterPro:IPR036422"
FT                   /db_xref="UniProtKB/TrEMBL:Q9GHH2"
FT                   /protein_id="AAY22147.1"
FT                   /translation="GAGFKAGVKDYRLTYYTPDYQVLDTDILAAFRMTPQPGVPPEEAG
FT                   AAVAAESSTGTWTTVWTDGLTSLDSYKGRCYDIEAVAGEENQYIAYVAYPLDLFEEGSV
FT                   TNLFTSIVGNVFGFKALRALRLEDLRIPPSYVKTFQGPPHGIQVERDKLNKYGRPFLGC
FT                   TIKPKLGLSAKNYGRAVYEGLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEALYKAQAE
FT                   SGEIKGHYLNATAGHCDEMIKRAQCAKELGMPIVMHDYLTGGFTANTSLAHYCRDHSLL
FT                   LHIHRAMHAVIDRQKIHGMHFRVLAKALRLSGGDHLHSGTVVGKLEGEREVTLGFVDLM
FT                   RDNFSEKDRQRGIYFTQDWVSLPGVIPVASGGIHVWHMPALVEIFGDDACLQFGGGTLG
FT                   HPWGNAPGAAANRIACEACVKARNEGRSLAAEGNTIIRDAAQWSP"
XX
SQ   Sequence 1333 BP; 398 A; 213 C; 294 G; 428 T; 0 other;
     cggagctgga tttaaagctg gtgttaaaga ttatcgttta acgtattata caccagacta        60
     tcaagtatta gatacagaca ttcttgcagc ctttcgaatg acacctcaac caggtgtgcc       120
     tcctgaagaa gctggtgctg cagtagctgc ggaatcatca acaggaacat ggacaacggt       180
     ttggacagat ggattaacaa gtttagatag ttacaaagga cgttgctatg atattgaagc       240
     agtagctggt gaagaaaatc aatatattgc ttatgtagca tatcctttag atctttttga       300
     agaaggttct gtaactaatt tatttacttc aattgttgga aatgtttttg gatttaaagc       360
     attaagagca ttacgtctcg aagatttacg tattccgcca tcttatgtaa aaacatttca       420
     agggccgcct cacggtattc aagtagaacg tgataaactt aataaatatg ggcgtccttt       480
     tttaggttgt acaattaaac caaaattagg tctttcagca aaaaattatg gacgtgctgt       540
     ttatgaaggt ttaagaggtg gactagattt tacaaaagac gatgagaatg taaattcaca       600
     accttttatg cgttggcgtg atcgttttct ttttgttgct gaagcacttt ataaagcaca       660
     agctgaatca ggtgaaatca aaggtcatta cttaaatgct acagctggac attgtgatga       720
     aatgattaag agagctcagt gtgctaaaga attaggtatg ccaattgtta tgcatgatta       780
     tttaacaggt ggttttacag ctaatacgtc tttagcacat tactgtcgcg accatagttt       840
     attacttcac atccatcggg caatgcatgc tgtaattgat cgtcaaaaaa ttcatggtat       900
     gcactttaga gttttagcta aagctttacg tctatctgga ggagatcatt tacactcagg       960
     aacagttgta ggtaaacttg aaggtgaacg tgaagttact ttaggttttg tagatttaat      1020
     gcgtgataac ttttctgaaa aagatcgtca acgtggaatt tactttactc aagattgggt      1080
     ttcacttcct ggagttatac cagttgcttc tggtggtatt catgtttggc acatgccagc      1140
     attagtagaa atttttggag atgatgcttg tttacaattt ggtggaggaa cactaggtca      1200
     tccatgggga aatgctcctg gagctgcggc taaccgtatt gcttgtgaag cttgtgttaa      1260
     agcacgtaat gaaggacgtt cactcgcagc agaaggtaat actattattc gtgatgctgc      1320
     tcaatggagt cca                                                         1333
//