ID   AY163260; SV 1; linear; genomic DNA; STD; INV; 645 BP.
XX
AC   AY163260;
XX
DT   15-DEC-2003 (Rel. 78, Created)
DT   15-DEC-2003 (Rel. 78, Last updated, Version 1)
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DE   Alvinocaris sp. TMS-2002 cytochrome oxidase subunit I gene, partial cds;
DE   mitochondrial gene for mitochondrial product.
XX
KW   .
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OS   Alvinocaris sp. TMS-2002
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea;
OC   Bresilioidea; Alvinocarididae; Alvinocaris; unclassified Alvinocaris.
OG   Mitochondrion
XX
RN   [1]
RP   1-645
RA   Van Dover C.L., Aharon P., Bernhard J.M., Caylor E., Doerries M.,
RA   Flickinger W., Gilhooly W., Goffredi S.K., Knick K.E., Macko S.A.,
RA   Rapoport S., Raulfs E.C., Ruppel C., Salerno J.L., Seitz R.D.,
RA   Sen Gupta B.K., Shank T., Turnipseed M., Vrijenhoek R.;
RT   "Blake Ridge methane seeps: characterization of a soft-sediment,
RT   chemosynthetically based ecosystem";
RL   Deep Sea Res. Part I Oceanogr. Res. Pap. 50(2):281-300(2003).
XX
RN   [2]
RP   1-645
RA   Shank T.M.;
RT   ;
RL   Submitted (13-OCT-2002) to the INSDC.
RL   Biology, WHOI, MS 33 Redfield, Woods Hole, MA 02543, USA
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DR   MD5; e04cf8eeb53076c1aff6a53d46cd710b.
DR   EuropePMC; PMC4498644; 26161742.
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FH   Key             Location/Qualifiers
FH
FT   source          1..645
FT                   /organism="Alvinocaris sp. TMS-2002"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:217445"
FT   CDS             <1..>645
FT                   /codon_start=2
FT                   /transl_table=5
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:Q6YBD6"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:Q6YBD6"
FT                   /protein_id="AAO18637.1"
FT                   /translation="MVGTALSLLIRAELGQPGSLIGNDQIYNVIVTAHAFIMIFFMVMP
FT                   IMMGGFGNWLMPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLSSGMVESGVGTGWTVYPP
FT                   LAAGIAHAGASVDMGIFSLHLAGVSSILGAVNFMTTCINMRTSGMTMDRMPLFVWSIFL
FT                   TAILLLLSMPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPP"
XX
SQ   Sequence 645 BP; 184 A; 159 C; 104 G; 198 T; 0 other;
     aatagtagga accgccctta gtctcctaat ccgagcagaa ctaggtcaac caggaagact        60
     tattggaaac gatcaaattt acaatgttat tgtcactgct cacgccttca ttataatttt       120
     ctttatagta atacctatta taataggtgg atttggaaat tgactcatac cccttatact       180
     aggagctcca gacatggctt tcccccgaat aaataacata agattttgac ttctaccccc       240
     ctctctaaca cttcttcttt ccagaggaat agtagaaaga ggagtaggaa caggatgaac       300
     tgtttaccca ccccttgcag caggcattgc tcatgctgga gcctctgtcg acatagggat       360
     tttctctctt catcttgccg gagtttcttc catcttagga gctgtaaact ttataacaac       420
     atgcatcaat atacgaacaa gaggaataac tatagaccgt ataccccttt ttgtttgatc       480
     aatcttctta acagcaatct tactcctcct ctccatacca gttctagcag gagctattac       540
     tatactacta acggatcgta accttaatac ctcattcttt gacccagcag gaggaggaga       600
     ccctattctc tatcaacatt tattctgatt ttttggtcac ccccc                       645
//