ID   AY143560; SV 1; linear; genomic DNA; STD; INV; 1682 BP.
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AC   AY143560;
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DT   23-MAY-2003 (Rel. 75, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 2)
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DE   Tintinnopsis fimbriata 18S ribosomal RNA gene, partial sequence.
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KW   .
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OS   Tintinnopsis fimbriata
OC   Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Choreotrichia; Tintinnida; Codonellidae; Tintinnopsis.
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RN   [1]
RP   1-1682
RA   Strueder-Kypke M.C., Lynn D.H.;
RT   "Sequence analyses of the small subunit rRNA gene confirm the paraphyly of
RT   oligotrich ciliates sensu lato and support the monophyly of the subclasses
RT   Oligotrichia and Choreotrichia (Ciliophora, Spirotrichea)";
RL   J. Zool. (Lond.) 260:87-97(2003).
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RN   [2]
RP   1-1682
RA   Strueder-Kypke M.C., Lynn D.H.;
RT   ;
RL   Submitted (21-AUG-2002) to the INSDC.
RL   Zoology, University of Guelph, Guelph, Ontario N1G 2W1, Canada
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DR   MD5; 701ad2205a59f3fef6e147a33801626c.
DR   PR2; AY143560.
DR   RFAM; RF01960; SSU_rRNA_eukarya.
DR   SILVA-SSU; AY143560.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1682
FT                   /organism="Tintinnopsis fimbriata"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Ft. Pierce Inlet, FL; 27deg27.N/80deg19.W"
FT                   /db_xref="taxon:211012"
FT   rRNA            <1..1682
FT                   /product="18S ribosomal RNA"
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SQ   Sequence 1682 BP; 434 A; 350 C; 451 G; 447 T; 0 other;
     gaaactgcga atggctcatt aaaacagtta tagtttattt ggtaatcaaa cttacatgga        60
     taaccgtggt aattctagag ctaatacatg ctgttgtgcc cgactcacga agggcggtat       120
     ttattagata tcagccaata agcatctgct attgtggtga ctcatagtaa cttaatcgga       180
     tcgcatgggc ttgtcccgcg acaaaccatt caagtttctg ccccatcatg ctttcgatgg       240
     tagtgtattg gactaccatg gctttcacgg gtaacggagg attagggttc gattccggag       300
     agggagcctg agaaacggct accacttcca cggaaggcag caggcgcgta aattacccaa       360
     tcctgattca gggaggtagt gacaagaaat aatgggtcgg ggtttcaccc cgggactgca       420
     atgagacgaa tttagacccc ttgtcgagga ccaattggag ggcaagtctg gtgccagcag       480
     ccgcggtaat tccagctcca atagcgtata ttaaagttgt tgcagttaaa aagctcgtag       540
     ttggatttct ggtagtggaa tcgggcgctc atgcgagatg cccgcgtcca ttgccatcct       600
     tctgttaacc tttcaggaca ttcatttgtc ggttaggggc tcagatattt taccttgaga       660
     aaattagagt gtttcaggca ggcttgtgcc cgaatacatt agcatggaat aatggaatag       720
     gactttagcc tcttctgttg gtctgagggg ttgaagtaat gattaatagg gatagttggg       780
     ggcattagta cttaactgtc agaggtgaaa ttctcggatt tgttaaagac taacttatgc       840
     gaaagcattt gccaaggatg ttttcattaa tcaagaacta aagttagggg atcaaagacg       900
     atcagatacc gtcctagtct taaccataaa ctatgccgac tcgggatcgg gggccagagt       960
     taactgcctt cggcaccgta tgagaaatca aagtctttgg gttctggggg gagtatggtc      1020
     gcaaggctga aacttaaagg aattgacgga agggcaccac caggcgtgga gcttgcggct      1080
     caatttgact caacacgggg aaacttacca ggtccagaca tagtgaggat tgacagattg      1140
     atagctcttt cttgattcta tgggtggtgg tgcatggccg ttcttagttg gtggagtgat      1200
     ttgtctggtt aattccgtta acgaacgaga ccttagccta ctaaatagcc gcgacaattc      1260
     tcattgtccg cgacttctta gagggacttt gcaagcaact gcaaggaagt ttgaggcaat      1320
     aacaggtctg tgatgccctt agatgtcctg ggccgcacgc gtgctacact gacgcataca      1380
     gcgagtatcg ccagctccgt gaggctgctg gtaatcagca atatgcgtcg tgctggggat      1440
     agatctttgg aatttttgat cttgaacgag gaatgcctag taagcgcagc tcatcaggct      1500
     gcgttgatta agtccctgcc ctttgtacac accgcccgtc gctcctaccg atttcgagtg      1560
     gtccggtgaa ccctttggac cgagagcgcc tcgtgtgctt ttggaaagtc gagtaaacca      1620
     catcacttag aggaaggaca agtcgtaaca aggtttccgt aggtgaacct gcagaaggat      1680
     ca                                                                     1682
//