ID AY039807; SV 1; linear; genomic RNA; STD; PHG; 4100 BP. XX AC AY039807; XX DT 31-JUL-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 3) XX DE Bacteriophage phi-12 membrane protein P10 (10), membrane protein P6 (6), DE host attachment protein P3a (3a), host attachment protein P3b (3b), and P3c DE (3c) genes, complete cds. XX KW . XX OS Pseudomonas phage phi12 OC Viruses; Riboviria; Cystoviridae; Cystovirus. XX RN [1] RP 1-4100 RX DOI; 10.1006/viro.2001.1288. RX PUBMED; 11853405. RA Gottlieb P., Wei H., Potgieter C., Toporovsky I.; RT "Characterization of phi 12, a bacteriophage related to phi 6: nucleotide RT sequence of the small and middle double-stranded RNA"; RL Virology 293(1):118-124(2002). XX RN [2] RP 1-4100 RA Gottlieb P., Wei H., Toporovsky I.; RT ; RL Submitted (13-JUN-2001) to the INSDC. RL Microbiology and Immunology, Sophie Davis School of Biomedical Education, RL City College of New York, 138th Street and Convent Avenue, New York, NY RL 10031, USA XX DR MD5; 3a46cbe86b6e2c153ba360e2ffdc90b6. XX FH Key Location/Qualifiers FH FT source 1..4100 FT /organism="Pseudomonas phage phi12" FT /segment="M" FT /mol_type="genomic RNA" FT /db_xref="taxon:161736" FT CDS 184..315 FT /codon_start=1 FT /transl_table=11 FT /gene="10" FT /product="membrane protein P10" FT /db_xref="GOA:Q94ML4" FT /db_xref="UniProtKB/TrEMBL:Q94ML4" FT /protein_id="AAK74122.1" FT /translation="MDKILNPVLAPFSSDRASKTSPAGIAVAYGLIGLLVGVLVLKD" FT CDS 682..1410 FT /codon_start=1 FT /transl_table=11 FT /gene="6" FT /product="membrane protein P6" FT /note="anchor for host attachment proteins" FT /db_xref="GOA:Q94ML3" FT /db_xref="UniProtKB/TrEMBL:Q94ML3" FT /protein_id="AAK74123.1" FT /translation="MGFFKSIKKAIKSVVKAVVKVVKAVVKAIVSVIKAVVKLIKKIVS FT VILDFISKIFSNIGVILLLILLVIFAWFLFPAFAAFLQSAWAWIVNIFSTGWAWVVKTA FT GAAWQAITSFASTAWGYITAAWEWIAGAVGFIWKGLSGAADAVWEAAKELGSAAGGVLS FT GVWDFIKENPELIAGGAALAWLGKDGLILVGLGVAAYFLLKSSGSKGGGRGEQKVVINT FT TGEAYAPSPYRTGSGAPRIA" FT CDS 1361..2473 FT /codon_start=1 FT /transl_table=11 FT /gene="3a" FT /product="host attachment protein P3a" FT /db_xref="UniProtKB/TrEMBL:Q94ML2" FT /protein_id="AAK74124.1" FT /translation="MLLRRTAQVVVPPGSPSAIVTGQTLNVLRNTVGSPQYNKGAQLLT FT GWETEADGQTVNVQSFEQKWGDSTISFVDGGRFIAELNSTTTSTTRLPCMPRMIHVPGQ FT FIASTSPLAIDMAEEEDQMINVLRQAGFTVTENDFWKLPCYVYRMTNLTVKKLFGDDFA FT PLFDFARMFRRYGPGELMLQALQHDSDKRHLMSLSDIVGVKVESAGDELGTLLDALELG FT SFTELVSLLNMVNAMTSMRFAKVLTTAKDEAGVGMTLYYAMMDAAYLCSLPLDMVQAFG FT AGDSTGKVTLNTFEGVVIPQLEIQIREEDKIHIPTLRSITAGAYESMQKARLLYRMMLV FT VRFMEYRGYPLTVDTTLKSTDRRQFFELLM" FT CDS 2473..2733 FT /codon_start=1 FT /transl_table=11 FT /gene="3b" FT /product="host attachment protein P3b" FT /db_xref="UniProtKB/TrEMBL:Q94ML1" FT /protein_id="AAK74125.1" FT /translation="MEEFSVPEGHTFPRVGEGAGFTLAGFAACLTGNKSTQFTEIRSVC FT GFQDDDDLMEVVLNPNVVTRIWFFQAASAYIQKGEEHWTVK" FT CDS 2718..3824 FT /codon_start=1 FT /transl_table=11 FT /gene="3c" FT /product="P3c" FT /db_xref="UniProtKB/TrEMBL:Q94ML0" FT /protein_id="AAK74126.1" FT /translation="MDSQVVPSLLSLGVGGLAGYQLGKNSVAQPEVDPTSDAATIAGLN FT QRIALLQAQSEAQAALVAAMKDQSTTGLAVQAQLQAQINDLSSKLSGQQVTLFNNFPAV FT FGTGDPAVGGWIKGRDGLLINRVLPNFIPMKSLITTVTGYDKTWATTSIAISDITTKLA FT AWPITIGRSVNNTLRVSHFNGIFGSMATILNFAEEVADDPDFTCSASIYDNGTYHASCL FT AIPIGRNSLMLLPGTIVNVPSGYNYEDWNANMLKDCTRAAASGGIAIPTLAQRGSYISG FT RQGITLQLSHRTARSLTLRSWNIVAHPLAQWQETWRMNLTDLGDTNSRRQGATSVVTRM FT NTSLTPKFFRPNDQGDYDTVDVTQSSYM" XX SQ Sequence 4100 BP; 865 A; 1116 C; 1181 G; 938 T; 0 other; gaattaatta aattttatct gcctagaaga tagttatcgg ccctgaccag gtacgaggcg 60 aatctagcaa ctctggataa tacccggagg ggacgctcgg ctttagtgca cgaggcccgt 120 gcaattagca ccgcggtcaa taaactggtg cgacaaacca tcccatctat taggagttcc 180 aacatggata agatcctgaa tccggtgctt gcgccgtttt cctccgatcg cgcctcgaag 240 acctctccgg ccggcatcgc cgtcgcctac ggactcattg gtctgttggt tggtgtgctc 300 gtcctgaaag actaaggcat gaacggtggc caatcgcaag gatccctggc ccaacagaat 360 cagaacactc ggcgtttcca tcgggtttct gttcctctct tacggctgtg ggattctctc 420 caccgacgcg tgcgcagttc tgtcaccggt tgcggtaaag gtcaaatcat cgatagcttt 480 gctgtgtaca tacggactga taggctacgg catcgcgtcg ctcatccacg tgtgaggtaa 540 tcgcatgaaa ttcaaccgta aaggggtcct ctcgctggtg ggagccgctt gtctggtgat 600 cgccgggttg gtaactcaca accccgccct catcgcgact ggcgtttcca ccgccaccga 660 agcggtccaa acggcccagt aatgggtttc ttcaagtcaa tcaagaaggc gatcaagtcg 720 gtagtcaagg ctgtggtcaa ggtagtgaaa gcggtagtga aagctatcgt ttccgtgatc 780 aaagctgtag tgaagctgat caagaagatt gtttctgtga tcctggattt catatccaag 840 atattcagta atataggagt gatcctgctc ctcatccttt tggtcatctt cgcatggttc 900 ctgtttcctg cgttcgccgc gttccttcag tccgcatggg cgtggatcgt caacatcttc 960 tccaccggct gggcatgggt ggttaagacc gcaggagctg cgtggcaggc tattaccagc 1020 ttcgcaagca cggcgtgggg ttacattacc gcggcgtggg agtggattgc tggtgccgtc 1080 ggtttcatct ggaaaggctt atccggcgcc gcagatgcgg tgtgggaagc agctaaagag 1140 ttgggctcgg cagctggtgg cgttttgagc ggtgtttggg acttcatcaa ggagaatccc 1200 gaactaatcg ctggcggcgc tgctcttgca tggctcggca aggatggctt gatcctagtt 1260 ggcctaggtg ttgccgcgta cttcctactg aagagctctg gttctaaggg tggtggtcgt 1320 ggtgaacaga aggtcgtaat caacacaaca ggggaagcat atgctccttc gccgtaccgc 1380 acaggtagtg gtgccccccg gatcgcctag cgcgatcgta acggggcaga ccttgaacgt 1440 gctcaggaat accgtaggta gtcctcagta caacaaaggt gctcagctgc tcacaggctg 1500 ggaaacagag gccgacggcc agacggtcaa tgtccaatcg ttcgagcaaa agtggggcga 1560 cagtaccatt tcgttcgtcg acggcggtcg tttcatcgcc gaactgaaca gcaccacgac 1620 gagcacgact cgtttgccgt gcatgcctcg catgattcac gtgccgggcc agttcatcgc 1680 aagcacatcg ccattggcga tcgacatggc cgaggaagaa gatcagatga tcaacgtcct 1740 ccgccaggcg ggtttcacgg tcaccgaaaa cgacttctgg aaactaccgt gttatgtcta 1800 tcggatgacg aatctcaccg tgaagaaact gttcggtgac gatttcgctc ctctgttcga 1860 cttcgcacgc atgttccgtc gctacggtcc aggcgaactt atgctgcaag ccctgcagca 1920 tgattccgac aaacggcatc tgatgtcgct gtcggatatc gtcggcgtca aagtcgaatc 1980 tgctggcgac gaactcggca ctctgctgga cgcgttggaa ttgggttcgt tcaccgaact 2040 ggtgagcttg ctcaacatgg tgaacgccat gacctccatg cgtttcgcca aggtgttgac 2100 caccgctaag gacgaagcgg gcgtcgggat gacgctctac tatgccatga tggacgctgc 2160 ctatctgtgc agtcttccgc tggacatggt gcaagcgttc ggtgcgggtg actcgaccgg 2220 caaggtaacg ctaaacacct tcgaaggcgt ggtaattccg cagctcgaga tccagatacg 2280 ggaggaggat aagatccata ttcctactct ccgttcgatt actgcagggg cttacgagtc 2340 catgcagaag gctcggctcc tgtaccgtat gatgctggtt gtgcggttta tggagtatcg 2400 cggttacccg ttgacggtgg acactaccct caaatcaact gaccggaggc agttctttga 2460 actgttgatg taatggagga attctccgta ccagaaggcc acacgtttcc acgtgtcggc 2520 gagggcgccg ggttcaccct cgcaggcttc gccgcctgtc tcaccggcaa caaatccact 2580 cagttcacgg agattcgttc cgtgtgtggt tttcaggacg acgatgatct gatggaagtc 2640 gtcctcaacc cgaacgtagt gacacgcatc tggttcttcc aggctgcgtc ggcctacatc 2700 cagaaaggcg aagagcattg gacagtcaag tagttccatc gttgctgtcg ttgggcgtcg 2760 gtggacttgc gggttaccaa ctcggcaaga actctgtcgc tcaaccggag gtcgatccga 2820 cttcggacgc ggccaccatc gccggcttga accagcgcat cgcgcttctg caggctcaga 2880 gtgaggcaca agcggcgctt gttgcagcca tgaaggacca gtcaacgacc ggtctggctg 2940 tgcaggccca actgcaggct cagatcaatg atctgagttc gaagctctct gggcagcagg 3000 tcacgttgtt caacaacttc cccgcggtat tcgggaccgg cgacccggct gttggtggtt 3060 ggatcaaagg tcgtgatggc cttctgatca accgcgtgct gccgaacttc attccaatga 3120 agtcgctgat caccactgtg accggttacg ataagacgtg ggcgaccact tctatcgcta 3180 tctcggacat cacgacgaag ttggcggcgt ggccgatcac tatcggccgt tccgtgaaca 3240 acaccctgcg tgtgtctcac ttcaacggca tcttcgggtc gatggcgacc atcctcaact 3300 tcgctgagga agtggccgac gatccggact ttacgtgttc cgcgtcgatc tacgacaatg 3360 gcacctatca cgcctcgtgt ttggcaattc cgatcggtcg taactcgttg atgctgcttc 3420 ctggcaccat cgtgaacgtt ccgagcggct acaactacga ggactggaac gccaacatgc 3480 tgaaggactg cacacgggca gctgcgtcgg gtggcattgc tattccgact ctggcacagc 3540 gtgggtcgta catcagcggt cgtcagggta tcaccctgca gttgagtcac cgtacggcgc 3600 gcagcctgac gctgcgcagc tggaacattg tggcgcatcc actggcgcaa tggcaagaga 3660 cgtggcgtat gaacctgacc gatctggggg acaccaactc ccgtcgccaa ggggcaacca 3720 gcgtagtcac ccggatgaac accagcctca cgccgaagtt cttccgtccg aacgatcaag 3780 gtgattacga cactgtcgac gtcacccaat cgtcgtacat gtaatgctga ccgatacgga 3840 ggtggagtgg cgtgatgcgt tggtggccaa aggctgtcca cgtaccggtg ccaacgcgct 3900 tgtgttggcc ggcatccgca ctatggagtg cgtcaaacat cattctctgg atggcatcca 3960 gggtgtccat ggtgttgggc cgcagaccat gaaatgggtg ttggaacaac gtatctaagg 4020 ctacattggc ccctggggga gcgacctagg gtgagagagg aatctctata aatattccga 4080 gccgctaacg cggctcctcc 4100 //