ID AJ421486; SV 1; circular; genomic DNA; STD; PRO; 8716 BP. XX AC AJ421486; XX DT 05-JAN-2002 (Rel. 70, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Lactobacillus delbrueckii subsp. lactis plasmid pJBL2 XX KW DNA binding protein; replication protein; restriction enzym. XX OS Lactobacillus delbrueckii subsp. lactis OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; OC Lactobacillus. OG Plasmid pJBL2 XX RN [1] RP 1-8716 RA Pridmore R.D.; RT ; RL Submitted (05-DEC-2001) to the INSDC. RL Pridmore R.D., Bioscience, Nestle Research Center, PO Box 44, 1000 Lausanne RL 26, SWITZERLAND. XX RN [3] RX DOI; 10.1006/plas.2001.1560. RX PUBMED; 11982337. RA Bourniquel A.A., Casey M.G., Mollet B., Pridmore R.D.; RT "DNA sequence and functional analysis of Lactobacillus delbrueckii subsp. RT lactis plasmids pN42 and pJBL2"; RL Plasmid 47(2):153-157(2002). XX DR MD5; dc9108fbb9c889d769359cb933d7651b. XX FH Key Location/Qualifiers FH FT source 1..8716 FT /organism="Lactobacillus delbrueckii subsp. lactis" FT /plasmid="pJBL2" FT /sub_species="lactis" FT /strain="JCL414" FT /mol_type="genomic DNA" FT /db_xref="taxon:29397" FT CDS complement(159..1349) FT /transl_table=11 FT /product="putative Type I restriction enzyme hsdS subunit" FT /note="ORF1" FT /db_xref="GOA:Q8VN13" FT /db_xref="InterPro:IPR000055" FT /db_xref="UniProtKB/TrEMBL:Q8VN13" FT /protein_id="CAD13349.1" FT /translation="MNDTQAKYPQLRFKGFADPWEQCKLGDVAKITMGQSPNSKNYTDN FT PKDHILVQGNADMKDGQVHPRIWTTEITKIADKGDLILSVRAPVGDIGKTSYDVVIGRG FT VAAIKGNEFIFQLLKRMKTVGYWTKYSTGSTFESINSLEINNAVINLPKEHEQNKVGKI FT LSYMDHAITLHEEKKRQLECLKSALLQKMFADKSGYPVVRFEGFSDEWEERKLGDAVSI FT SSGVTGDATLQDGEYRLTRIESISQGTLNVARLGFTNKKPDQKYLLNLGDILYSNINSL FT SHIGKVALVDTTGIYHGINLLRFQMRNDVDSEFLFQRLNTTPMKNWAVSHANPAVSQAS FT INQTELSKQPISLPTITEQQKIGSFFKQLDKTIALHQRKLDLLKEQKKGFLQKMFV" FT CDS 1783..2340 FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q8VN12" FT /protein_id="CAD13350.1" FT /translation="MENSAGMLSVGQIAKMLKTNRQNIYNVLKAEHIKPDGFNDKHYSL FT YSPETIQEIKAALSKKATLRSKKVVAKEQAEEIADLKNQLSEQQRLTTWLQSQLVQLQV FT EADKLRSQNSQLQLDNAKTQLLIGQVDQEKTTLKAENDRLSAENEKLGQLTDKVLKDAQ FT RAEEDAQKAKADLDKAAGWLMV" FT CDS 3374..3712 FT /transl_table=11 FT /product="putative DNA binding protein" FT /note="ORF5" FT /db_xref="UniProtKB/TrEMBL:Q8VN11" FT /protein_id="CAD13351.1" FT /translation="MTLDLHYNYSRKAERSPNVRLTQTDLELVKNWKLHGLTNVEIAQK FT IGIAEKTLYVWLKKSPKLKKAIRGGQDIARARAENALYELALNGDRQALFFWLKNNYRE FT RYSDKPLS" FT CDS 5013..5984 FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q8VN10" FT /protein_id="CAD13352.1" FT /translation="MNNSEKTSLMAEPYNSDRNAIDRLRINQKALQAGSVKREETYIAD FT ESGNSEASEWPSYTANKSGVQYAIPVEAEPDKMVINETFSKVQHLLIASWYSQPDRTSN FT FRIQLTFKEISEALGYSRSQATALRKQLRTLTVTLVRCTFVNSNKDGIDAVNLSAAGNY FT SKGKLTMWLTPNMAERLLSEESSTEYFPLSLLKLKGTAYYLALKVMHNANINARWHADR FT VDRLGLENTLKALPTLPDPVTMSAKNGKHIQQKILTPLAKAIEELEAVTGIVVRPSQPL FT KGLRTKDLSKVTLNVIDWGQVDIAELTRKKRKRLRKNNVRED" FT rep_origin 6007..6071 FT /direction=RIGHT FT /note="putative origin of replication" FT CDS 6278..8122 FT /transl_table=11 FT /product="putative replication protein" FT /note="ORF2" FT /db_xref="GOA:Q8VN09" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR007694" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR034154" FT /db_xref="InterPro:IPR036977" FT /db_xref="UniProtKB/TrEMBL:Q8VN09" FT /protein_id="CAD13353.1" FT /translation="MNNNLVKPADLKSLVSLPEYIASVVSMDSKGFFSCLNPNHPDKHP FT SMCVDRNHPQYVHCFSATCQASYDLFDCWALINDGVTETRKNSTGKEKPVYNFNAVASE FT IADHYGYTLIGDPANNLPEPPLPEPEPEPAQTSTNFRDQLEAWHANLNQTDYLQKRGIT FT QTTAEIFNLGYSPLTNSIIIPYGQDGYYVQRALNPIEKHDRYRFPIGQVRVYNAEALKE FT CKTVFIVEGQFDALSIMQESGVGAVATSASQTQLIVKTLQKFKEQDPTINPTIILSMDN FT DRAGQKANRALQRDLEAHGFTCYVNPVNGDYKDANEFLVKDREGFRQKLQHVINQPDNW FT LDKYYADIKQRHDYPDNIPTGFKNLDDELDGGLQPKLYVLGAVSSLGKTTFALNVADNL FT AKQGRHVFFFSMESSKREVTDKLLSRASCLSNGHKWTQLQVSRGAWLNNAEDKEKFDGL FT FKAFSRYQRFLHIYDNRVKASQVKDLVNGWLDNHPDEKKPLVVVDYLQILQVEQDNVTD FT KAKVTDSVSVLSELTKQAEVPVLVISSLNRASYWQDVSFESFKESGEIEYSADVMLGLE FT FAHREEYITVQKNGHVELNKEKFDQRKQEVLDGLKWSF" XX SQ Sequence 8716 BP; 2660 A; 1809 C; 1978 G; 2269 T; 0 other; tacaattttg ctatactccc acctatttat acgggctgaa cctgctttaa tcaagccaag 60 cgtcttacag acgttcagtc tatgttgtca tatttgtact cccgttttta gggctgtttt 120 aaaagtattt tttaggggcg attttataat tatagaccct aaacgaacat cttttgtaaa 180 aagccttttt tctgttcttt caacaaatct aacttacgtt gatgaagagc gatagttttg 240 tcgagttgtt tgaagaatga acctattttt tgttgttcag ttattgttgg caacgaaatt 300 ggctgtttac ttaattccgt ttgattaatg cttgcttggc tgactgcggg attcgcgtgc 360 gaaactgccc aatttttcat tggcgtcgtg tttagtctct gaaataaaaa ttccgaatca 420 acatcattgc gcatttggaa tcgcaaaaga ttaattccgt gataaatccc tgtcgtatca 480 accaaagcca cctttccaat gtgactcaat gagttaatat tgctgtaaag aatatcgccc 540 aaatttagaa gatacttctg gtctggtttt ttatttgtga atcctaacct cgcaacattc 600 aacgttcctt gcgaaatact ttcgatgcgt gtaagtctat attcgccatc ttgaagtgtt 660 gcgtcacccg tgactccact tgatatacta accgcatcac ccaacttacg ctcttcccac 720 tcgtcactaa atccttcaaa tctaacaaca ggatacccac tcttgtcagc gaacatcttc 780 tgcaataaag cgcttttcaa gcattcaagt tgacgtttct tttcctcatg taaagtgatg 840 gcatgatcca tataggaaag tatctttcca accttatttt gttcatgctc cttagggaga 900 tttattaccg cattatttat ttctaatgaa ttaatgctct caaatgttga accagtacta 960 tatttagtcc aataacctac tgttttcatt cgtttaagca gttgaaaaat aaattcatta 1020 cctttgatgg cggctactcc acgaccgata accacatcat agcttgtttt tccaatatcg 1080 cctacaggtg ctctaacgct taagattaaa tcacctttgt ctgcgatttt tgttatttcc 1140 gtagtccaaa ttctaggatg tacttgacca tccttcatat ctgcatttcc ttgaacgaga 1200 atgtgatctt ttggattatc agtgtaattt ttagaatttg gtgattgacc catggtgatt 1260 tttgccacgt cccccaactt acactgctcc caaggatcag cgaaaccttt aaatcttaat 1320 tgcggatatt tagcttgtgt atcattcatt attttttctc cggtttaatg tctaaggcca 1380 ttttatcaaa ttaagaatca gcaaaaccta ttttgtgtct ggtggaacca acaagcggct 1440 agaaaatatg ctgccaaaca ccctaaagaa caaaatattg ataacgagca tacttggcat 1500 taaacggcgt ataagctcat ttaagccgtt ttaagtgtta tatgcataat tatattaaag 1560 ctgctttaaa atcgcttaga agtaagaata ggcatcttga gtggctgaat tggcgatgac 1620 tgaactaagg actaggccaa gaaacttttg cgcagtcaac aattccccgg actggttcgg 1680 aattttgctt cctggccagg ccttctaatg gtcggcaagg tcagctgctt cagcggtcaa 1740 tcgtgtataa tatagtcaag attgacaaga ggagggctga caatggaaaa tagcgctggc 1800 atgctgtcag ttggtcaaat agctaaaatg ctgaagacca acagacagaa catttacaac 1860 gtgcttaaag ctgagcatat taaaccggac ggcttcaatg acaagcacta ttcactttac 1920 agcccggaaa cgattcaaga gatcaaggcg gctctgtcta agaaggcaac gctgagaagt 1980 aagaaggtag tagcaaaaga gcaggctgaa gagatagctg acttgaagaa tcagctgtca 2040 gaacagcaga gattgacaac ctggctacag tctcagctgg ttcaacttca agtagaggct 2100 gacaagctaa ggagtcagaa cagccagtta cagctagaca acgcaaagac tcagctcctt 2160 attggccagg ttgaccagga gaagacaaca ctgaaggccg aaaatgaccg actgagcgct 2220 gaaaatgaaa aactaggaca attaaccgat aaggtgctga aggacgctca gagagcagaa 2280 gaggacgctc agaaggctaa agctgatcta gataaagcgg cgggctggct tatggtctag 2340 aatcaccagg aattattaag agtggtatag ccgttatctg actttgtgaa attccttatt 2400 gggtctgtca gatcaagcga ttttaaacct atacgagttt gtgaatccta gtttacggaa 2460 ttaggcgaca aggaagcccg tcattgcaag gatagaaggt tagttccaat aagacacatt 2520 atgtaaagtt gcaagtggta taaggtcgca aaacgctacc ttagctcata ggagggtaaa 2580 aaatagacag ccgggaaaag gacttccaac aagcgctctt actggacttg gtggctggaa 2640 ttttcggccg tatgaagacc aggacaagca agacggggca accgttacag tgccatgagc 2700 tattcagact gcctggaaga aattataaac tgctactaaa aaagactacc cgcaataggt 2760 agccttttta tgtgcctgga aaaaccttaa aaaaccatag attttcgttt accacgtgtg 2820 ggtaaaacct gtcaaaactt gacatttata gcaaccagac tttacgcctg taactggagt 2880 tacggacatg gttttcccta cctgacgcct taagttaagc ttagaccgct tgcctgcaag 2940 ggagcggcga ttcgtggttt cgcacaagtg gagaaaaaac tggtaaatac gggtatgaag 3000 tggagtttct aaggcatcta taaaagagag cctaacaaaa ccggacattt tgttaacctt 3060 aatatttctt aatatctgct gcggggcaag ggagcgggcg gtttgtgtct ttcagcaagt 3120 ggcaaaaaaa ggtaaatact ggtacatcta aaagacagtc cccaatagtg ggagctggag 3180 tgaagatgac tccctaaagc agggacctca ccgaagacat tcccttaaaa gagtgagcga 3240 ttcgctacca cccttccctt cctaacatgt tgggaaaggc gattggaaag ttgtaagtgg 3300 tatacctgta attggttgac aggtactaga cataggctag acacttgcca gcattgactg 3360 tagcggtttt acaatgacac tagatctaca ctataactac agtagaaagg ctgagcggtc 3420 tcctaatgta cgactgactc agaccgattt agagctggtc aagaattgga aattacacgg 3480 gctgactaac gttgagatag ctcagaagat aggtattgct gagaagacct tgtatgtttg 3540 gttgaagaag tctcctaagc tgaagaaggc cattagaggc gggcaagata ttgccagggc 3600 tagggctgag aatgcactgt atgagcttgc tcttaatggc gatagacaag cccttttctt 3660 ctggctcaaa aacaactaca gagaacgcta ctcagacaag ccgttaagtt aagagctgaa 3720 gccgatttga tgagtcagaa ggcaagactg gccaaattac aggctgacct ggctgaggct 3780 cagctgaagg ccattaagga agaccaggga gaccaagcaa cgaaattaaa caacctgtta 3840 gacagtctaa aggaagccgt gttaggtgag ggaatcagcc ccaataacat cgttcctact 3900 ggcaacggct taattatcga tgatacttct gactcttatg tttacacgac attgacagtg 3960 taaacacaag atagcggaaa atcttctgat tattatattt acaagtactg tatattgtgt 4020 tattctaaga atgtgaagag gaattaaaga acggagttag ggaaaaggta tcaacttttt 4080 ttgtttcgct ctttaatact ctttagcaaa aagctagata tcaaaaaaga gcgagccggc 4140 attaattcac gggttcgctc ttattttttt atcggttgcg gcttgcgtac ggtgcttttg 4200 cggtcaatag acggtttaag tgtattgcat tgcactagca agcatggtag aaataataat 4260 agacaacaaa aaaagccttt agtgctggta acactagagg cgggctgtgt tcagtgctgg 4320 taacgctaaa cacggttaaa gccatatttt tctttacaga atatgatact tttaaacttt 4380 acattctgtc aagggtgacg tatcacttct aaagtacata tagtagtttt cttctaacat 4440 tatgttgtaa aaacataaca ttttgtagac aaacactata cttctatgac tctaaccatg 4500 tttaagacag gccaggctaa caccctactg gcctgttttt tgttgccaaa atttcaaaag 4560 aaaggcggta acaaccgtga ttaaacaaca aaacagcgat gttagagcgg ctattaaagc 4620 ttctggcttg aagcaatatg aggtagctac tttgatgcat gtttcagcta gctatctcag 4680 ccagcttcta cttcaaccat tgtcagaagg ccataagaaa cgcgttatgg cggcgattaa 4740 acaaggtgag tcattgaagg gagaacaaga ataatgatga gcttagaaga gcgtgagcgt 4800 gagattgaaa aggtagtacg cattgctgaa gctgacttca acaacgcttg tcaattgcat 4860 gctatcaaca aggaagacgt tattaagaac caggcttaca agtatgctga agtgctgaag 4920 cttcaggaat tgctggcatt gaacaagacc ataagacggg ctgaatggta ttgaaatgtc 4980 agtagatctc attgagtacg gggagacccg ctatgaacaa tagtgaaaaa acttctctaa 5040 tggctgagcc gtataactca gaccgcaacg ccattgacag actcagaatc aaccagaagg 5100 ccttacaggc gggctctgtc aagcgtgaag agacctatat agccgatgaa tccggcaact 5160 cagaggcttc agaatggcct tcctacacgg ccaataagag cggcgttcag tacgctatac 5220 cagtagaggc tgagcccgac aaaatggtaa taaatgagac cttcagcaag gttcaacatc 5280 tactaattgc cagctggtat agccagccag acagaacaag taacttcaga atacagctga 5340 ccttcaaaga gatctcagag gcgctaggat acagcagaag ccaggctaca gcgctcagaa 5400 aacagctgag aacgctgact gtaacgctag tacgttgtac ttttgttaac agcaataaag 5460 acggcataga cgctgtcaat ctctctgctg ctggcaacta cagtaaaggg aagctgacaa 5520 tgtggttaac tcctaacatg gctgagcggc ttctgtcaga agaatcatct acagaatatt 5580 ttccgttatc gttactgaag ctgaaaggga cagcctatta tttagcctta aaggtcatgc 5640 acaacgcaaa cattaatgca cgctggcatg ctgacagagt tgacagattg ggcttagaaa 5700 acacgctgaa ggccttgcct acactccccg acccggtaac catgagcgcc aaaaatggta 5760 aacacattca gcaaaaaatt ttaactcccc tggctaaagc cattgaagag cttgaagccg 5820 tcactggcat tgtcgttaga cctagccagc cgctaaaggg actgaggaca aaagacctgt 5880 ctaaagtcac tctgaatgtc attgattggg gacaggtcga catagcagaa ttgaccagaa 5940 aaaagcgaaa acgtttgcga aaaaataatg ttcgtgagga ctaaaactat atttttttaa 6000 attcgtatgt aggtaattat ggtcactaat gtaggtaatt atggtcacta atgtaggtaa 6060 ttatggtcac attgtgaaat ttcagcaagt gccttgaagc cttgagccag tagggagtaa 6120 gcgcattttt ttaaaaagtt tcacttgtta atagtttaat agtattaaaa gcaacggcac 6180 agcttgacgc tggccttgct tgaaaattga aaaaagatga aacagccagg gagagcagag 6240 gcttctactg gcctgttttt agaagaaggt atctagcatg aacaataatt tagttaaacc 6300 agcagattta aagagcttgg tctctttacc ggaatacatt gccagcgtgg ttagcatgga 6360 ctctaaaggc ttctttagct gtctcaatcc gaaccacccc gacaagcacc ctagcatgtg 6420 tgtagatcgt aaccacccgc aatatgttca ttgcttcagc gccacttgcc aggccagtta 6480 tgacctgttt gattgttggg ctctgattaa tgacggcgtg acagagacca ggaagaatag 6540 cactggcaag gaaaagccag tctataactt caatgctgta gcttcagaga tagctgacca 6600 ttacgggtat actcttattg gcgacccggc aaataacttg ccagaaccgc cattacccga 6660 accagagcca gagccagctc agaccagcac caattttaga gaccaattag aagcctggca 6720 tgctaacttg aatcagactg actatcttca gaagcggggg atcactcaga caacagcaga 6780 gattttcaat ttaggctact ccccgttgac caacagcatt attatccctt acggtcagga 6840 cggctattac gttcagagag cgcttaatcc gattgagaag catgaccgct acagatttcc 6900 tattggccag gtgagagtct acaacgctga ggcgctgaaa gaatgcaaga cggtattcat 6960 cgttgaaggt cagtttgacg ctctgtcaat catgcaagaa tccggtgtag gagctgtagc 7020 aacttcagcc agtcagaccc aactcattgt caaaacctta cagaagttca aagagcaaga 7080 cccaacaatt aacccgacta tcatactcag catggacaac gacagagcag gccagaaggc 7140 gaatagagca cttcagaggg acttagaagc gcatggcttt acttgctatg tcaacccggt 7200 taacggcgat tacaaggacg ctaacgagtt tctggtaaag gacagagagg gcttcagaca 7260 gaagcttcag catgtcatca accagcccga taattggctt gacaagtact atgctgacat 7320 taagcaacgc catgactacc cggacaatat ccctactggc ttcaagaatt tagatgatga 7380 gcttgacggc gggcttcagc ctaaactcta tgttttaggt gctgtatcat cattgggtaa 7440 aacgactttt gccttgaatg ttgctgacaa cctggctaaa caggggaggc atgttttctt 7500 cttcagcatg gaatctagca agagagaagt gacggacaag cttctaagcc gggctagctg 7560 tctctctaac ggccataaat ggactcagct acaagtcagc cggggagcat ggttaaacaa 7620 tgctgaggac aaagaaaagt ttgacggcct gtttaaagcc ttcagccgtt accagcgctt 7680 cttacacatc tatgacaata gagttaaggc aagtcaggta aaagacctgg tcaatggctg 7740 gcttgacaac cacccggacg aaaagaagcc gcttgtggtc gttgactatc ttcagatctt 7800 gcaagttgag caggacaacg tgacagacaa ggccaaggtg acggacagcg tgagtgttct 7860 ctcagagctg actaaacagg ctgaagtccc tgttctggtc atctcatcat tgaaccgggc 7920 ttcctactgg caagacgtaa gttttgaatc cttcaaggaa tccggggaaa ttgaatactc 7980 agctgacgtt atgttaggct tagagttcgc tcatcgtgaa gaatacatta cagttcagaa 8040 aaacggccat gttgaattga acaaagagaa gtttgaccag cgaaaacagg aagtcctaga 8100 cgggttgaaa tggtcattct gaagaatcga actggcaaga caggcggtca tatcttcttc 8160 aagtacaacg ccaagtacaa caactaccag gcatgcactg agaaagaggc ggcaatagca 8220 gcaactttaa taagttgttt catagcaagg aagtaggcaa gccaattgaa gcggccatgt 8280 ctgaatacac ggtagacccg gaaacaggcc ggtaacagag aagaatcaag ataaatagag 8340 ctgaagaagc tggccaggaa tggctggctt ttgttttgtc tgctgtccgt gtggatatca 8400 ccgaccgcct ggtccaggtt cgccagggag tgaccgggct aaaagtctga gcctttaaag 8460 ttgacgatca aaaattcgac agtcaaaact caaggcaaac aaaaagagcc gcaattcttg 8520 cagctctgag tgcagttgaa tgtcatgctc tgagatagcc ctagaaggcc catatttgcg 8580 ttctgaggcg ttttagcttt gcctggcaga attttgccca tgaccggggc tgaggatacc 8640 cccctgggcc aacatttggc gagaacgacc gtttgggagc gggcgccagg gggtaaagca 8700 cgataaattc gttttt 8716 //