ID AF226853; SV 1; linear; genomic RNA; STD; PHG; 3192 BP. XX AC AF226853; XX DT 11-APR-2000 (Rel. 63, Created) DT 13-SEP-2008 (Rel. 97, Last updated, Version 5) XX DE Pseudomonas phage phi8 segment S, complete sequence. XX KW . XX OS Pseudomonas phage phi8 OC Viruses; Riboviria; Cystoviridae; Cystovirus. XX RN [1] RP 1-3192 RX DOI; 10.1006/viro.2000.0374. RX PUBMED; 10873764. RA Hoogstraten D., Qiao X., Sun Y., Hu A., Onodera S., Mindich L.; RT "Characterization of phi8, a bacteriophage containing three double-stranded RT RNA genomic segments and distantly related to Phi6"; RL Virology 272(1):218-224(2000). XX RN [2] RP 1-3192 RA Qiao X., Sun Y., Qiao J., Mindich L.; RT "Temporal control of message stability in the life cycle of dsRNA RT bacteriophage F8"; RL Unpublished. XX RN [3] RP 1-3192 RA Hoogstraten D., Qiao X., Sun Y., Hu A., Onodera S., Mindich L.; RT ; RL Submitted (20-JAN-2000) to the INSDC. RL Microbiology, Public Health Research Institute, 455 First Avenue, New York, RL NY 10016, USA XX RN [4] RC Amino acid sequence updated by submitter RP 1-3192 RA Hoogstraten D., Qiao X., Sun Y., Hu A., Onodera S., Mindich L.; RT ; RL Submitted (14-AUG-2008) to the INSDC. RL Microbiology, Public Health Research Institute, 455 First Avenue, New York, RL NY 10016, USA XX DR MD5; 559af583c8606204df4568b223c53ed2. DR EuropePMC; PMC2612379; 18971268. XX FH Key Location/Qualifiers FH FT source 1..3192 FT /organism="Pseudomonas phage phi8" FT /segment="S" FT /mol_type="genomic RNA" FT /db_xref="taxon:120086" FT gene 188..1288 FT /gene="8" FT CDS 188..1288 FT /codon_start=1 FT /transl_table=11 FT /gene="8" FT /product="P8" FT /note="membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q9MC06" FT /protein_id="AAF63309.1" FT /translation="MGRIFQLLMRLGVKQGAASVGKAGIDAGSKRLLQQIMSKDGAIQL FT SKALGFTAVEQMSSEVLEAYLYEIVEHLLLVDEATLADALMACITDAGDIAIERLLPSV FT EDVDKGEALAATLTVVLALFSMNKEQAEELKRSMASKGLSPDRVTLGGQTLLTVKSTGT FT GLTEYDAQGKNGVPRGMSANKRTALFFVLYTVISTSWSVYDHYGEVKAGLARGELPPSA FT DRVELRAPGSSVSAIERETQRALQEEQPRALPSGSRTAERVAGPTQGDVPVLTPPPGRF FT TFTGEGDHRPDFAQLARQNDTDGVVRIIELDRIPDARKILVDGDHDYLLDAAQQRVAAD FT IGVSPESVGRFAALVASIINAKEKRS" FT gene 1288..1821 FT /gene="12" FT CDS 1288..1821 FT /codon_start=1 FT /transl_table=11 FT /gene="12" FT /product="P12" FT /db_xref="UniProtKB/TrEMBL:Q9MC05" FT /protein_id="AAF63310.1" FT /translation="MLKMLLATQGLTTASIMEILTGFVVRRVRLEAQPLVASMMPSVRE FT EVARALNDKAYRQVLAGAGQVTLRVFNGVGQLETPLVEIIKDIARLSSPTFKSMLEKAE FT RGENLGSMTDELAESIVAELVALISADATDVTTALSVPGADVERYRLIVDWLRGHIKSI FT EQKDLFPDIIDFLE" FT CDS 1885..2064 FT /codon_start=1 FT /transl_table=11 FT /product="P9" FT /note="membrane protein" FT /db_xref="GOA:Q9MC04" FT /db_xref="UniProtKB/TrEMBL:Q9MC04" FT /protein_id="AAF63311.1" FT /translation="MNGSIITDLFQAPLVAVGASDATPSKNHVIGGLLWGFLIGWILGV FT RQGKNNPAGNILGF" FT gene 2067..2576 FT /gene="5" FT CDS 2067..2576 FT /codon_start=1 FT /transl_table=11 FT /gene="5" FT /product="P5" FT /db_xref="InterPro:IPR008565" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:Q9MC03" FT /protein_id="AAF63312.1" FT /translation="MTARSQQMAERIVVREGGYWDDPGAGPTNFGIVQSTLNRLRSRPR FT WVGLPANVKDLKREQAVEIIRVEYVEAQKAHLMLPMIGEVIADTVVMSWDDGVRILQKL FT LGFEGKAIDGIVGKNTIGRSDQIPAFLDKTIAGLIVREFLDDRKGKQFVGGWSNRLHKV FT LEGEYV" FT gene 2569..2835 FT /gene="I" FT CDS 2569..2835 FT /codon_start=1 FT /transl_table=11 FT /gene="I" FT /product="PI" FT /db_xref="UniProtKB/TrEMBL:B4DCU0" FT /protein_id="ACG69469.1" FT /translation="MFKDLLRLLVKGAVKGAAEEAFSGKVRVEAATTGAKALQVAKQVG FT KASLLGVVKYGLPGSLVILGAESLLSVECVQQIGSLIGSLINN" FT gene 2850..3086 FT /gene="J" FT CDS 2850..3086 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="PJ" FT /db_xref="UniProtKB/TrEMBL:B4DCU1" FT /protein_id="ACG69470.1" FT /translation="MLILASQFSKRPLLIWENGVMAAIERGSIVRISNMELASVHRFAA FT MRKLVEINVNEVDPAIIEDYLKQTGQTQSAKRA" XX SQ Sequence 3192 BP; 714 A; 813 C; 925 G; 740 T; 0 other; gaaattttca aatcttttga ctatttcgct ggcatagctc ttcggagtga agccttccct 60 gaaaggcgcg aaggtcccca ccagctcggg gtgattcgtg acatttcctg ggatctcgga 120 gtcagctttg tctctaggag actgagcgtt cggtctcagg tttaaactga gattgaggat 180 aaagacaatg ggtagaatct ttcaactgtt gatgcgctta ggcgttaaac agggtgcagc 240 aagtgttggt aaagccggga tcgatgctgg tagcaagcga ttgctccagc agatcatgtc 300 caaagacggt gctattcagc tgtctaaggc actcggtttc accgctgtgg agcagatgtc 360 gagtgaagtg ctcgaagcgt atctctatga gatcgttgag catcttctgc tcgtcgacga 420 ggccacgttg gccgatgcgc ttatggcgtg tatcaccgat gcaggtgata tcgccattga 480 gcgtctgctt ccttccgtag aggatgtcga caaaggcgag gcgcttgccg ccacgctgac 540 tgtcgtcttg gctctcttct cgatgaacaa agaacaagct gaagagctta aacgttcgat 600 ggcatcgaaa ggcttgagtc cggaccgggt taccctcgga ggacagaccc tgttgaccgt 660 caagtccact ggtactggcc tgacagagta tgacgctcaa ggcaagaatg gcgtccctcg 720 cgggatgtct gctaacaagc gtactgcatt gttcttcgtg ctgtacacag tgatcagtac 780 ttcctggtcc gtatacgatc actatggtga ggttaaagct ggtctcgcac gaggcgagct 840 acctcccagt gctgatcgtg ttgaattgcg ggcccccggt tcctccgtaa gtgcgatcga 900 gcgtgagaca caacgcgcac tgcaagaaga acagccgcgt gcattgcctt cgggcagccg 960 caccgcggaa cgggttgctg ggccgacgca gggtgatgtc cccgtgctca cacctccgcc 1020 aggtcgattc accttcaccg gtgagggcga ccatcgtccc gatttcgcac aactcgctcg 1080 ccagaacgac actgatggcg ttgtgcggat cattgaactg gatcgcattc cagatgcaag 1140 gaaaatatta gtcgatggtg accatgacta cttgctggac gccgctcaac agcgcgtcgc 1200 tgccgatatc ggggtatcgc ccgagtcagt aggtcgattc gctgctctgg tagccagtat 1260 catcaacgcg aaggagaagc gttcgtgatg cttaagatgc tgctcgctac gcaaggtctt 1320 acgaccgcat ccatcatgga aattctcact ggttttgtgg tgagacgggt tcgactcgag 1380 gctcagcctt tggtcgctag tatgatgccc tccgttcgtg aggaggttgc tcgagcgctc 1440 aacgacaagg cgtacaggca agtactcgca ggggctggcc aagttacact ccgtgtattc 1500 aacggggttg gtcagctgga gacaccactt gtcgagatta tcaaggatat cgcccgactg 1560 tcatccccta ccttcaagag catgctcgag aaggcggaga gaggcgagaa tcttggtagt 1620 atgaccgacg aactcgcaga gtccatagtg gcagagttgg ttgcgctgat ctcagccgat 1680 gcaaccgacg tgacgacagc actctctgtc ccaggcgctg acgtggagcg ctaccgtttg 1740 atcgttgatt ggctcagggg tcacatcaag tcgattgagc aaaaagatct gttcccggac 1800 atcatcgatt tcctggagta ggttacgtta tcaaggagaa gttaggagtg acatgaagac 1860 gcacaaaaca taaggattta cctcatgaat ggttccatca tcactgatct gttccaagct 1920 ccactggttg ctgttggcgc gtccgacgca actccgtcca agaatcacgt catcggcggc 1980 ctcctgtggg gcttcctgat cggctggatc ctgggcgttc gccaaggcaa gaacaatcct 2040 gccggcaata ttctgggctt ctgatcatga ccgcgcgcag ccaacaaatg gctgagcgaa 2100 tcgtggttcg ggaaggcggc tactgggatg acccaggcgc tggcccgacc aacttcggca 2160 tcgttcagtc gacgctgaat cgtttgcgct ctcgtcctcg ctgggtaggc ttgcctgcca 2220 atgttaagga cctcaagcgt gaacaagcgg tcgagatcat ccgcgttgaa tacgtggaag 2280 ctcagaaagc ccatctcatg ctgccaatga tcggcgaagt aattgccgat acggtagtga 2340 tgtcctggga tgatggtgta cgcattctcc agaagctctt gggcttcgaa gggaaggcga 2400 tcgacggtat cgtcggcaag aacaccatcg gccggtcgga tcaaattccg gccttcctcg 2460 acaaaaccat cgctggtctt atcgttcgtg agttcctcga cgatcgcaaa ggcaagcagt 2520 ttgttggtgg ttggtccaac cgtctgcaca aagtattgga aggtgagtat gtttaaggac 2580 ttgcttcgtc ttctggtgaa gggtgcggtc aagggtgccg ctgaagaagc tttcagtggt 2640 aaggtccgcg ttgaggcagc gacaaccggt gcgaaagcgc tgcaagtcgc gaagcaggta 2700 ggcaaggcgt cgctgttagg cgtcgtgaag tacggcctgc ctggtagtct cgtgatactg 2760 ggggcggaat cgctcctcag cgtagagtgc gttcagcaga tcggttcgtt gattggttca 2820 ttaatcaaca actaatcgga gtagagcgta tgctcatact agcctcacag ttctccaagc 2880 gtcccctcct gatctgggag aatggcgtaa tggcggccat tgagcgagga tccatcgtcc 2940 gcatatccaa tatggaatta gcgtccgttc atcggttcgc tgcaatgcgt aagctcgttg 3000 agatcaacgt caatgaggta gaccctgcaa tcattgagga ctacctgaag cagactgggc 3060 aaacccaaag cgcaaagcgc gcttagcggc aatcgaaccc tccgataagg aggtttagca 3120 aatccgcggc tcttatgagc tgtccgaaag gacaacccga aagggggagt gaggacttcg 3180 gtcctccgct tc 3192 //