ID AF128500; SV 1; linear; genomic DNA; STD; VRT; 1713 BP. XX AC AF128500; U71357; XX DT 18-AUG-2000 (Rel. 64, Created) DT 01-MAR-2002 (Rel. 70, Last updated, Version 6) XX DE Japalura flaviceps MVZ216622 NADH dehydrogenase subunit 1 (ND1) gene, DE partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes, complete sequence; DE NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, DE tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome c DE oxidase subunit I (COI) gene, partial cds; mitochondrial genes for DE mitochondrial products. XX KW . XX OS Diploderma flaviceps OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; OC Iguania; Acrodonta; Agamidae; Draconinae; Diploderma. OG Mitochondrion XX RN [1] RP 1-1713 RX PUBMED; 9000751. RA Macey J.R., Larson A., Ananjeva N.B., Papenfuss T.J.; RT "Replication slippage may cause parallel evolution in the secondary RT structures of mitochondrial transfer RNAs"; RL Mol. Biol. Evol. 14(1):30-39(1997). XX RN [2] RP 1-1713 RX DOI; 10.1080/10635159950173843. RX PUBMED; 12118408. RA Macey J.R., Schulte J.A.II., Larson A.; RT "Evolution and phylogenetic information content of mitochondrial genomic RT structural features illustrated with acrodont lizards"; RL Syst. Biol. 49(2):257-277(2000). XX RN [3] RP 1-1713 RX DOI; 10.1080/10635159950173834. RX PUBMED; 12118407. RA Macey J.R., Schulte J.A.II., Larson A., Ananjeva N.B., Wang Y., RA Pethiyagoda R., Rastegar-Pouyani N., Papenfuss T.J.; RT "Evaluating trans-tethys migration: an example using acrodont lizard RT phylogenetics"; RL Syst. Biol. 49(2):233-256(2000). XX RN [4] RP 1-1713 RA Macey J.R., Larson A., Ananjeva N.B., Papenfuss T.J.; RT ; RL Submitted (20-SEP-1996) to the INSDC. RL Biology, Washington University, Box 1137, St. Louis, MO 63130-4899, USA XX RN [5] RP 1-1713 RA Macey J.R., Schulte J.A.II., Larson A., Ananjeva N.B., Wang Y., RA Pethiyagoda R., Rastegar-Pouyani N., Papenfuss T.J.; RT ; RL Submitted (16-FEB-1999) to the INSDC. RL Biology, Washington University, Box 1137, St. Louis, MO 63130-4899, USA XX DR MD5; 6b1acd923a516e53a69ee88e6e7e40c2. DR EuropePMC; PMC5885388; 29515092. DR RFAM; RF00005; tRNA. XX CC On Oct 25, 2000 this sequence version replaced gi:1753294. XX FH Key Location/Qualifiers FH FT source 1..1713 FT /organism="Diploderma flaviceps" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /country="China:Sichuan Prov., Aba Zangzu Autonomous FT Prefecture, east side of Wenchuan (31deg. 28N, 103deg. FT 35E)" FT /specimen_voucher="MVZ216622; Museum of Vertebrate Zoology, FT University of California at Berkeley" FT /db_xref="taxon:52218" FT CDS <1..90 FT /codon_start=1 FT /transl_table=2 FT /gene="ND1" FT /product="NADH dehydrogenase subunit 1" FT /db_xref="GOA:Q9G361" FT /db_xref="UniProtKB/TrEMBL:Q9G361" FT /protein_id="AAG00735.1" FT /translation="QFLPMTLAMCLLFTTLPLSTSAIPPNNYT" FT tRNA 72..143 FT /product="tRNA-Gln" FT tRNA 152..220 FT /product="tRNA-Ile" FT tRNA 220..286 FT /product="tRNA-Met" FT CDS 295..1321 FT /codon_start=1 FT /transl_table=2 FT /transl_except=(pos:1321..1321,aa:TERM) FT /gene="ND2" FT /product="NADH dehydrogenase subunit 2" FT /note="TAA stop codon is completed by the addition of 3' A FT residues to the mRNA" FT /db_xref="GOA:Q9G360" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003917" FT /db_xref="InterPro:IPR010933" FT /db_xref="UniProtKB/TrEMBL:Q9G360" FT /protein_id="AAG00736.1" FT /translation="MQTTATVAIFMGLTISSTLVMMSNNWLLAWLNLEMNTLAALPVIS FT KTKHPRAIEASTKYFLTQTTASCLLLLSCTTNAWYTGTWNITQMDDMYTSTTMLVALTM FT KAGTVPTHFWLPEVMQGSTLTTTILMSTWQKIAPMALIFSMSNHASPNITLILGLLSTT FT FGGWGGMNQTQLRKMMAYSSIANMGWTVMILTSQPKASMISILTYIITITPAILMMELM FT STKTLQNMTTSWSTSPTTSTILALLLLSTAGLPPLTGFIPKLLILNELVTQNLTPAAVV FT ATATSLLSLIFYLRTAYLTTLLNSPGSATSTMKWRQKIETKATILTPTALTTMTVLPAM FT TK" FT tRNA 1334..1336 FT /product="tRNA-Trp" FT tRNA 1396..1463 FT /product="tRNA-Ala" FT tRNA 1474..1545 FT /product="tRNA-Asn" FT stem_loop 1547..1568 FT tRNA 1567..1617 FT /product="tRNA-Cys" FT tRNA 1617..1680 FT /product="tRNA-Tyr" FT CDS 1681..>1713 FT /codon_start=1 FT /transl_table=2 FT /gene="COI" FT /product="cytochrome c oxidase subunit I" FT /db_xref="GOA:Q9G359" FT /db_xref="UniProtKB/TrEMBL:Q9G359" FT /protein_id="AAG00737.1" FT /translation="MSYLARWLLST" XX SQ Sequence 1713 BP; 589 A; 518 C; 229 G; 377 T; 0 other; caattcctac ccataaccct agccatatgc ctactattta ccactcttcc actatcaaca 60 tctgccatcc ctccaaacaa ctatactagg aagagaggat ttgaacctcc atctaagagt 120 ccaaaactct ttgtatgccc aataatactg ccccctaaaa gaaatgtgcc cgaacataag 180 gactattttg ataaaataga catagagcct atcgaacctc tcatttctta tcagggtctg 240 ctacataagc agttgggccc ataccccaaa aacggtaata tgtaccccct gacaatacaa 300 accacagcca ctgtcgccat cttcatagga ctaaccatca gcagcaccct cgtcataata 360 agcaacaact gactgctagc ctgactcaac ctagaaataa acacgctagc cgccctaccc 420 gtgatttcaa aaaccaaaca cccacgagca attgaagcct caacaaaata cttcctaaca 480 cagactaccg cctcctgcct actactgctt tcttgcacca ctaacgcctg atacacaggc 540 acctgaaata ttacccaaat agacgacata tatacatcaa ccacaatgct agtagcctta 600 acaataaaag caggcacagt cccaacacac ttctgattac cagaagtaat acaaggaagc 660 accctcacca caaccatctt aatgtcaacc tgacaaaaaa tcgccccaat agccctaatc 720 ttctccatat caaatcatgc ctcaccaaac atcacattaa tcctaggcct actatcgaca 780 actttcggag gttgaggcgg catgaatcag acacaactac ggaaaataat agcctactct 840 tcaattgcca acataggctg aacagtaatg atcctaacct cacaaccaaa agcatcaata 900 atcagcatcc ttacctacat tattactatt accccagcaa tcctaataat agaacttata 960 tcaacaaaaa ctttgcaaaa cataacaaca tcctgatcaa catcccccac cacatccaca 1020 atccttgcac tcctacttct atcaacagct ggactacccc ctctcacagg attcatccca 1080 aaactattga tcctaaatga actggtaacc caaaacctaa cacctgccgc tgttgttgca 1140 acggcaacct cacttctaag cctaatcttt tatctacgga cagcctacct cacaacatta 1200 ttaaactctc caggctctgc cacatcaaca ataaaatgac gacaaaaaat tgaaaccaag 1260 gcaacaattc ttacaccaac agccctgaca accatgacag tgctccccgc aataaccaaa 1320 taggaactta ggactaacaa aaccggagac cttcaaagtc acaaataaga gtacaaccct 1380 cttagtacct gcaaataagg actgcaagac tacactcaca tcgcctgaat gcaactcaga 1440 cactttaatt aagctaagac cttattacag gctacggatc agcgggcctc gatcccacaa 1500 aaaacagtta acagctggcc acccaatcca gagggcatta atccggctac tccttttaaa 1560 aagagtagac ccaggaacga agttcttcta caaatttgca atttgtcttg ctgggccgaa 1620 ccgaggggca tcgccccata agcggattta caaaccgccg cctaaatcag ccacctgtcc 1680 atgtcctatt tagcccgatg gctcctatca act 1713 //